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SCNpilot_BF_INOC_scaffold_7889_3

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 1915..2673

Top 3 Functional Annotations

Value Algorithm Source
Capsular polysaccharide biosynthesis protein CpsC n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6WBI5_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 36.5
  • Coverage: 252.0
  • Bit_score: 158
  • Evalue 1.20e-35
Capsular polysaccharide biosynthesis protein CpsC {ECO:0000313|EMBL:CDD01501.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental sa similarity UNIPROT
DB: UniProtKB
  • Identity: 36.5
  • Coverage: 252.0
  • Bit_score: 158
  • Evalue 1.70e-35
cpsC; capsular polysaccharide biosynthesis protein CpsC similarity KEGG
DB: KEGG
  • Identity: 34.8
  • Coverage: 250.0
  • Bit_score: 155
  • Evalue 2.20e-35

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Taxonomy

Ruminococcus sp. CAG:382 → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 759
ATGGAAAAAGCATTTACAATTAATGATATAATATCCATGTTTATGAGGAGGCTGTGGCTGATTGTTGCCATGGCGTTGATCGGAGGAGTGATCTCTTTCGCATATTCTCAATACGTAATACAAAAAAAATACACATCCTCAGTGACTCTTTATGTTTATAATCAGTCTAATTTGCAAGCAACAACGCTCACTGCGAATGATTTCGCCCTTTCTGCAAAATTAGTCGAAACCTATCTGGTTATTTTAAAAAGCAATCAGGTCTTAGACGCCGTATCTGCCAGGATCAAGACGCTTGGCCTGAACTATTCGTCAAGTCAGATCAGATCCATGATCAAGGCGGCTGCAGTTTTGGACACGGAAGTATTTGAGGTGTCCGTATCCTCTACCGACAAAGAGCACGCAAAGACAATAGCCGATGCGATCAGTGTGGTTGCGCCGCCGGAAATTATTCGTGTGGTGAAGGCCGGCTCGGTTGAAATTGTTGATAAAGCGGTTGTTCCTACCTCGCACAGCACACCGAATGTGACCCAAAATACAATCCTCGGAATTATATTGGGCATTGCGTTGTCAGCTGGTCTGGTATTTTTGCTGGAGCTGATGAATACCTCTGTAAAAAGCAAAGAGGATTTGGTTGAGATGTACAAGCTGCCTGTTCTGATGGTAATACCAAGCTTGAATTTTGATGAAGGAAAAGCCGATAAATACTCATATTATGATTATCAGTCATACCAAGGAGGATCGAATGAAGCTACTAAATAA
PROTEIN sequence
Length: 253
MEKAFTINDIISMFMRRLWLIVAMALIGGVISFAYSQYVIQKKYTSSVTLYVYNQSNLQATTLTANDFALSAKLVETYLVILKSNQVLDAVSARIKTLGLNYSSSQIRSMIKAAAVLDTEVFEVSVSSTDKEHAKTIADAISVVAPPEIIRVVKAGSVEIVDKAVVPTSHSTPNVTQNTILGIILGIALSAGLVFLLELMNTSVKSKEDLVEMYKLPVLMVIPSLNFDEGKADKYSYYDYQSYQGGSNEATK*