ggKbase home page

SCNpilot_BF_INOC_scaffold_8441_4

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(3818..4489)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MII8_ALKOO similarity UNIREF
DB: UNIREF100
  • Identity: 76.6
  • Coverage: 222.0
  • Bit_score: 366
  • Evalue 2.60e-98
two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 76.6
  • Coverage: 222.0
  • Bit_score: 366
  • Evalue 7.30e-99
  • rbh
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABW19620.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 222.0
  • Bit_score: 366
  • Evalue 3.60e-98

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Alkaliphilus oremlandii → Alkaliphilus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 672
ATGTACAAGATTTTAATAGTGGAGGATGACAAGGTTATTTCGGCAGCCGTGAAAAATCACATTAAATCATGGGGGTGGGAGTCGGAACGCATCAAAGATTTTGAAAATGTTATTGCATTTTTTGCTTCATATGAGCCTCAGTTGATTTTGATGGATATATCTCTGCCATTTTTTAACGGATATCACTGGTGCAGTGAAATAAGAAAAATATCCAAGGTTCCTATAATATTCATATCCTCGGCGTCTGACAACATGAACATTGTTATGGCAATGAATATGGGCGGAGACGACTTCATTGTAAAACCCTTTGACTTGAATGTGCTCACTGCCAAGGTGCAGGCAATGCTTAGGCGTACCTATGATTTTGCAGCGTCAACAACGCTGATTGAGCATATGAGAGCAATCCTCAATATAAATGATAATTCGCTGACCTATGATGGCGAAAAGATAGAGCTTACAAAAAATGAATTTAAAATTCTGAATATTCTCATGGAAAACAAGGGAAAGATAGTAAGGCGCGATGTACTGATGAACAGGCTGTGGGAAACGGATAGCTACGTTGATGAAAATACCCTTACTGTAAATATTACAAGGCTTCGCAAGAAATTAGAGGCTGCGGGACTGGAGAATTTTATATCAACTAAAAAAGGTATGGGGTATATAGTTGAATGA
PROTEIN sequence
Length: 224
MYKILIVEDDKVISAAVKNHIKSWGWESERIKDFENVIAFFASYEPQLILMDISLPFFNGYHWCSEIRKISKVPIIFISSASDNMNIVMAMNMGGDDFIVKPFDLNVLTAKVQAMLRRTYDFAASTTLIEHMRAILNINDNSLTYDGEKIELTKNEFKILNILMENKGKIVRRDVLMNRLWETDSYVDENTLTVNITRLRKKLEAAGLENFISTKKGMGYIVE*