ggKbase home page

SCNpilot_BF_INOC_scaffold_9192_4

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(2658..3323)

Top 3 Functional Annotations

Value Algorithm Source
TraG/TraD family protein n=2 Tax=Clostridium difficile RepID=G6BDC6_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 54.7
  • Coverage: 150.0
  • Bit_score: 175
  • Evalue 8.30e-41
Type IV secretory pathway, VirD4 components similarity KEGG
DB: KEGG
  • Identity: 60.1
  • Coverage: 148.0
  • Bit_score: 171
  • Evalue 2.00e-40
Tax=BJP_IG2157_Clostridiales_52_13 similarity UNIPROT
DB: UniProtKB
  • Identity: 88.0
  • Coverage: 150.0
  • Bit_score: 263
  • Evalue 3.30e-67

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

BJP_IG2157_Clostridiales_52_13 → Dethiosulfatibacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 666
ATGAGAGTGAGAAAGATCGTCGTGAAAGCGTTGCCCTATCTACTACTCTTTCTGTTGTTTTCGAAGGTTGGTCAAGCGATACGACTCACACCCGGGTCCGATTTCAGCGAAAAAGTGCTCAAGCTGTCGGCTGGATTTGCCGCCGCGTTTGCCAATTGGATGCCCAGTTTTCACCCGAACGATCTGCTGTTTGGGCTGATCGGAGCCGCCACGGTTTGGCTCGCGGTGTATGTGAAAGGCAGGAACGCTCGAAAATATCGAAAAGGCGAAGAATACGGCAGCGCGCGCTGGGGGACGGAGAAAGACATCCGTCCCTTTATCAATCGGACGTTCTCCGAAAACATCATACTCACGCAGACCGAGCGCCTGACGCTTGGGCAGATTGCCGATCCCGAACGGCGAAACGTCAACCTCAACGTGCTGGTCATCGGCGGCTCCGGCTCCCGACGAGGAGTTGCGCGCCGCAACGAAATCCGTCGGCAAAGGCTACACGATTCAGCGCTACAAGGGCCTTGGCGAGATGAACCCGGAGCAGCTTTGGGAAACGACCATGAACCCGGAAGGCCGCGCGCTGATTCGCGTAACAATCGAGGACGCGGCGGACGTGGAGCACCTCGTCACCGTGCTCATGGGAAACACGCGAAAGGACGGCACGACCAGCGGTGA
PROTEIN sequence
Length: 222
MRVRKIVVKALPYLLLFLLFSKVGQAIRLTPGSDFSEKVLKLSAGFAAAFANWMPSFHPNDLLFGLIGAATVWLAVYVKGRNARKYRKGEEYGSARWGTEKDIRPFINRTFSENIILTQTERLTLGQIADPERRNVNLNVLVIGGSGSRRGVARRNEIRRQRLHDSALQGPWRDEPGAALGNDHEPGRPRADSRNNRGRGGRGAPRHRAHGKHAKGRHDQR*