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SCNpilot_BF_INOC_scaffold_9195_1

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(186..605)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DRL1_CLOS4 similarity UNIREF
DB: UNIREF100
  • Identity: 36.7
  • Coverage: 128.0
  • Bit_score: 91
  • Evalue 7.70e-16
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ERI99515.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 36.7
  • Coverage: 128.0
  • Bit_score: 91
  • Evalue 1.10e-15
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 34.1
  • Coverage: 138.0
  • Bit_score: 88
  • Evalue 1.40e-15

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Taxonomy

Clostridium sp. ATCC 29733 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 420
ATGGATGAAAAGTATTATTGGTATTTACATGGCAGTAAATTTGAAATTTCCCGAAAAACTTATGACGAGAATCGTTCAGAGGAAAATCATCAGAACTACATAAAAAGATTAGAAAAAACACACGGCTTATGCTCATACCATAATTTAGACATTAACGGTATGACAGGCGAAGAAATAATTGCAGATACATCTGTTAATATTGAGGAACAGGTATTAAAGAATATTATGCTTGAAAAGCAAAGGGAATGTTTTAAATTATTAACAGAAGATGAAGCTTTTATTATAAAACAAATATATTTCGAAAACAAAACAGATAGAGAACTTGAAAAAATCACTGGTATTCCTAAGTCGACAATTAATGATCGCAAACAGAAAATACTAAAAAAGCTAAAGGAATTAATAGAAAATAAAAAGATTTAA
PROTEIN sequence
Length: 140
MDEKYYWYLHGSKFEISRKTYDENRSEENHQNYIKRLEKTHGLCSYHNLDINGMTGEEIIADTSVNIEEQVLKNIMLEKQRECFKLLTEDEAFIIKQIYFENKTDRELEKITGIPKSTINDRKQKILKKLKELIENKKI*