ggKbase home page

SCNpilot_BF_INOC_scaffold_9834_4

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 3735..4733

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000373D739 similarity UNIREF
DB: UNIREF100
  • Identity: 72.2
  • Coverage: 324.0
  • Bit_score: 478
  • Evalue 5.30e-132
Transcriptional regulator LacI family {ECO:0000313|EMBL:CCX51455.1}; TaxID=1262696 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 44.6
  • Coverage: 323.0
  • Bit_score: 287
  • Evalue 3.20e-74
LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 43.2
  • Coverage: 329.0
  • Bit_score: 282
  • Evalue 1.60e-73

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Alistipes sp. CAG:514 → Alistipes → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 999
ATGAAAAAAGTATCCATGCAGGATATCGCAGATAAGTTAGGTGTTTCGAAAGGAACAGTCTCACTGGTGTTGAGCGGAAAAGCCAAATCAGGTCGCATCAGTGATGAAACAAGTCAGAAGGTAAGACAGTTAGCTGTAGAAATGAACTACTATCCAAATGAAATCGCTCGGAGCCTTACTACCGGCAAAAGCATGTCAATTGGTGTGATAATTACTGATATTTCAAATGAATTTTTTGGAAATCTGACATTCCATATCCAAGAAAGAGCAAAAAAATATGGTTATACTGTAATCACTACAAACACAAACGAAAGATTAGATGAATTTAATGATGCCGTTACTATACTTTTAAATAGACAGACGGATGGAATTATCTTAGTTCCTGTTGATGGAGGAGAAGAAATTACACAAAAAATAATTGCAAGACACATTCCATTAGTCCAAGTTGACCGCTTTTATCCCGCAATCAATGCCAGCTACATCATCGTAGATAACTATAAAATATCTGCAAAAATGACTGAAATGTTGATAGAAAAAGGAAATAGGAGAATTGCTGTTGTTTGTTACGACATTAAGTTAAATGCATTGATGGACAGGAAACAGGGATGTATTGATGTTTTAAATCAGCACAATTTGTTTGATCCGGCATTAATTAAGGATATTAACTATGAGCAACAAGAAGAAGAGATACATAAGGCAATAGTTGAATTTAAAAATAATATGGATAAAGTTGATGCTATATTCTTTTGTTCTAGAAGGGTTTTCATTACGGGTATGAAATATATGCATAAAGAAGGTATTAGGATTTCTGAAGAAATGGATGTTGTTTGCTTTGACAAAATTGATTCATTTTCAATTGCAAATATTCCTTTTAATTTCATTGAACAACCGATTAAGGATATGGGTGAAAAAGCAGTCGATATTCTAATGAATCAAATTAATGGCAAAAATACGATTAATCAGTATTTACTTGAAGCACAAATCAGACGACATGCTTAA
PROTEIN sequence
Length: 333
MKKVSMQDIADKLGVSKGTVSLVLSGKAKSGRISDETSQKVRQLAVEMNYYPNEIARSLTTGKSMSIGVIITDISNEFFGNLTFHIQERAKKYGYTVITTNTNERLDEFNDAVTILLNRQTDGIILVPVDGGEEITQKIIARHIPLVQVDRFYPAINASYIIVDNYKISAKMTEMLIEKGNRRIAVVCYDIKLNALMDRKQGCIDVLNQHNLFDPALIKDINYEQQEEEIHKAIVEFKNNMDKVDAIFFCSRRVFITGMKYMHKEGIRISEEMDVVCFDKIDSFSIANIPFNFIEQPIKDMGEKAVDILMNQINGKNTINQYLLEAQIRRHA*