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SCNpilot_BF_INOC_scaffold_214_30

Organism: SCNpilot_BF_INOC_Chimera

partial RP 28 / 55 BSCG 26 / 51 ASCG 5 / 38
Location: comp(36219..36716)

Top 3 Functional Annotations

Value Algorithm Source
Transcription antitermination protein RfaH n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82X31_NITEU similarity UNIREF
DB: UNIREF100
  • Identity: 73.9
  • Coverage: 165.0
  • Bit_score: 257
  • Evalue 1.20e-65
Transcription antitermination protein RfaH {ECO:0000256|HAMAP-Rule:MF_00951}; TaxID=1192124 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 75.8
  • Coverage: 165.0
  • Bit_score: 260
  • Evalue 1.60e-66
rfaH; transcriptional activator similarity KEGG
DB: KEGG
  • Identity: 73.9
  • Coverage: 165.0
  • Bit_score: 257
  • Evalue 3.50e-66

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Taxonomy

Burkholderia sp. lig30 → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 498
ATGCACTGGTATCTCGTTCATACCAAGCCCAGGCAGGAAAAGAGCGCCCTGGAAAACCTCCAACGCCAAGGTTATCCCTGTTACCTCCCGACTCTCCCATCAGAAAAAATCCACCAAGGGATACTGATGACGACGGATGAGCCGCTGTTTCCGCGTTACCTCTTCATCCAGTTGGGCCACGGCGACTCCGCCAAGAGTTGGGCGCCGATTCGTTCGACCAAGGGCGTCAGCCGTCTGGTCTGCTTCGGGGCCGAGCCTGCCAAAGTGGATAATCGACTGATCGAGCTGCTACGGGCTCAGGAAATAGCGGCTCAGGCGAAACCAGAGCGGTTGTTCACGCCGGGAGAGCGGGTGCGTCTGACCGCCCCCCCGTTTGCAGGTGTCGAGGGCGTCTATCAGATGGTCGATGGCGAGCGTCGGGTGATGGTGCTGATCGAGATGCTGAGCAAACCGGTGGCCCTCCGAGTGTCACCGGCCAGTTTGCGCAAAGCCAGCTGA
PROTEIN sequence
Length: 166
MHWYLVHTKPRQEKSALENLQRQGYPCYLPTLPSEKIHQGILMTTDEPLFPRYLFIQLGHGDSAKSWAPIRSTKGVSRLVCFGAEPAKVDNRLIELLRAQEIAAQAKPERLFTPGERVRLTAPPFAGVEGVYQMVDGERRVMVLIEMLSKPVALRVSPASLRKAS*