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SCNpilot_BF_INOC_scaffold_214_91

Organism: SCNpilot_BF_INOC_Chimera

partial RP 28 / 55 BSCG 26 / 51 ASCG 5 / 38
Location: 98129..99628

Top 3 Functional Annotations

Value Algorithm Source
Putative Transcription factor, GntR family n=1 Tax=Pseudomonas brassicacearum (strain NFM421) RepID=F2KJP6_PSEBN similarity UNIREF
DB: UNIREF100
  • Identity: 81.6
  • Coverage: 499.0
  • Bit_score: 826
  • Evalue 1.20e-236
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 81.6
  • Coverage: 499.0
  • Bit_score: 826
  • Evalue 3.40e-237
Putative Transcription factor, GntR family {ECO:0000313|EMBL:AEA70272.1}; TaxID=994484 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 499.0
  • Bit_score: 826
  • Evalue 1.70e-236

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Taxonomy

Pseudomonas brassicacearum → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1500
ATGGCAAAGACCTTCGAACTCGAAACGCTGAAGATCCGGCTGAACGACGCCGATTTCCGGCTGCTGACCCTGCACCAGCGCATCCAGCGGGCCCTGCGCGCCCTGATCGTCGACGGCGCGCTCGGCCCCGGCGTGAAGCTGCCGGCGACCCGCGCGCTGGCCGCGTCGCTAGGCGTCGCCCGCGATACCGTCGAGAACGCCTACGTGCAACTGCACCGCGACGGTTTCATCGAGCGCCGGAAAGGGTCGGGAAGCTACGTTTCGGGAACGGTGGGCGCCGAACTGCGCGGCGCCGCGCGCCGGCGCCTGAAGCTCCAGGAGGACGGGCATGCGGCAACAGCGCCGGGAGCCGGGCTGAGCCGGCGCGGCCGGCTGATCCTCGAGAGCGGCGGGGTCGCCGACCAGCGGGTGATCAAGGCCTTCGCCACCGGGCTGCCCGAAACCCGCACCTTTCCGACCGAGGTCTGGGAGCGCCTGCAGCGCCAGGCGCTGAAGGACTATCGCGGCAACGTCCTGCTGCACGGCGATCCGCAGGGCGCCGAGCCGCTGCGCAAGGCGATCGCGGTTTACCTGAATCTCGAGCGCGGCGCCAAGGTGTCGCCCGAGCAGATCCTGGTGCTGAGCAGCACGCGGCAGTCCCTGTTCCTCTGCGCGCAGCTGCTGGTCGACGCCGGCAAGCCCATCCTGATGGAAAACCCGGGCTACTTCGGCGCCCGGAAATCCTTCGAGTCCGCCGAAGCCCGGGTCGTCCCCATCGACGTCGACGCCCAGGGCGTCCGCACGGACCTGCTGCGGGCCGACCGCAGCGGCGCCGCCTGCATCTACGTGACGCCGTCGCACCAGTACCCCACCGGGGCGACGCTGTCGCTCGAGCGCCGGCTGGAGCTGATCGGCTGGGCGGCCGAGCAAGGCAAGTGGCTGATCGAGGACGACTACGACAGCGAATTCCACTACGACGGCCTGCCGACCGCCTGCGTCCAGGGACTGGACAAGTATCGCCGGACGATCTATCTCGGGACCTTCAGCAAGACGCTCTACCCCGGCCTGCGCATGGCCTATATGGCGGTGCCGCGGGAGCTGGTCAGCGCGTTCGTCTACGCGCGCAGCATCATGGACGGGCACACGCCGCAGATCCTCCAGCTGACCCTGGCGCGCTTCATGGAGGACGGACACTACAACGCCCACGTGCGGGCCATGCGCAAGCTGTACGCCGGGCGCCGGGAAGCGATGCTCGCCGCCATCGGCCGGCATCTGGGCGGCATCGTGCGCGCGTCGCGGCCGGAGGGGGGGTTGCAGATACCGTGCTTTCTGGAGCCCGGGTGGACCGAGGAGGCGACCATCCGCCAGGCGGCCGGTGCCGGCGTGCAGCTGCTCGGAATGAGCCGGCTCTACCTGGGGCCGGAGGCGAGGCCGGGCTGGCTGCTGGGCTACGCCCATCTGACCGCGCATGAAATCGAGACCGCGATGGCGCGCCTCGCTTCGGCGCTGCGCAGGAACTAG
PROTEIN sequence
Length: 500
MAKTFELETLKIRLNDADFRLLTLHQRIQRALRALIVDGALGPGVKLPATRALAASLGVARDTVENAYVQLHRDGFIERRKGSGSYVSGTVGAELRGAARRRLKLQEDGHAATAPGAGLSRRGRLILESGGVADQRVIKAFATGLPETRTFPTEVWERLQRQALKDYRGNVLLHGDPQGAEPLRKAIAVYLNLERGAKVSPEQILVLSSTRQSLFLCAQLLVDAGKPILMENPGYFGARKSFESAEARVVPIDVDAQGVRTDLLRADRSGAACIYVTPSHQYPTGATLSLERRLELIGWAAEQGKWLIEDDYDSEFHYDGLPTACVQGLDKYRRTIYLGTFSKTLYPGLRMAYMAVPRELVSAFVYARSIMDGHTPQILQLTLARFMEDGHYNAHVRAMRKLYAGRREAMLAAIGRHLGGIVRASRPEGGLQIPCFLEPGWTEEATIRQAAGAGVQLLGMSRLYLGPEARPGWLLGYAHLTAHEIETAMARLASALRRN*