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SCNpilot_BF_INOC_scaffold_214_115

Organism: SCNpilot_BF_INOC_Chimera

partial RP 28 / 55 BSCG 26 / 51 ASCG 5 / 38
Location: comp(123001..123666)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal large subunit pseudouridine synthase A {ECO:0000313|EMBL:EIJ36198.1}; EC=5.4.99.- {ECO:0000313|EMBL:EIJ36198.1};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotri similarity UNIPROT
DB: UniProtKB
  • Identity: 57.4
  • Coverage: 216.0
  • Bit_score: 242
  • Evalue 4.60e-61
Pseudouridine synthase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BXV5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 57.4
  • Coverage: 216.0
  • Bit_score: 242
  • Evalue 3.30e-61
RluA family pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 57.4
  • Coverage: 216.0
  • Bit_score: 230
  • Evalue 4.70e-58

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 666
ATGGCATCCACTCCCTACCAGCCGCCCGCGCACCGAGGCCTTTCCCTGCTCTATCTCTCGGAGCAGCTACTCGTCGTCGACAAGCCCAGCGGCTTGCTGAGCGTACCGGGGCGCCACCCCGGCAAGGAGGACTGCCTGTCGCGCCGGGTACAGGCCGAGTTTCCCGACGCGATGATCGTTCATCGCCTGGACATGGGCACCTCGGGCATCGTCGTCATGGGGCGCGGAGCCAAGGCGCAGCGGGAGCTTAGCATCCAGTTCCAGGAGCGCAGGGTGCGCAAGCGCTACCAGGCCCTGGTCGATGGGCGCTGGACGGCTGCCGCAACAGGCGAGATCGCGTTGCCCATCGGCGTCGACGAGGCCAGTCACCCCAAACAGAAAGTCGATCACGCCACGAGCCGGCCGTGCCTGACCCGCTATTGCGTACTCGACAACGGCGCCGTACCTGCGGTTTCGCGCATCGAGCTCGAGCCCGTCACCGGACGTTCGCACCAGTTGCGGGTTCACATGGAAGCGATGGGGCATCCCATCCTCGGCGACGACTTCTACGGCACGCCGGCATCCTGCGCCAAGGCAGAGCGCCTGATGCTGCACGCCTGCCTGCTCGAATTCGACCATCCTGAAACGGGCGCGCTGCTGCGCATCGAATGCCCGCCGCCTTTCTGA
PROTEIN sequence
Length: 222
MASTPYQPPAHRGLSLLYLSEQLLVVDKPSGLLSVPGRHPGKEDCLSRRVQAEFPDAMIVHRLDMGTSGIVVMGRGAKAQRELSIQFQERRVRKRYQALVDGRWTAAATGEIALPIGVDEASHPKQKVDHATSRPCLTRYCVLDNGAVPAVSRIELEPVTGRSHQLRVHMEAMGHPILGDDFYGTPASCAKAERLMLHACLLEFDHPETGALLRIECPPPF*