ggKbase home page

SCNpilot_BF_INOC_scaffold_350_101

Organism: SCNpilot_BF_INOC_Chimera

partial RP 28 / 55 BSCG 26 / 51 ASCG 5 / 38
Location: 118765..119298

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQL0_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 57.3
  • Coverage: 171.0
  • Bit_score: 207
  • Evalue 1.60e-50
16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 171.0
  • Bit_score: 207
  • Evalue 4.50e-51
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 57.3
  • Coverage: 171.0
  • Bit_score: 207
  • Evalue 2.20e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 534
TTGTTATCTTTACAATACATGCAGCATTATATTAAAATCGGGAAATTTGTTGCCAGCCATGGTATTCATGGGCATCTATTATTAGCCCATAATTTGGGTAAAAAAACCTTGCTTAAAAATATACAGGCTTTATTTATAGAAGAGAAGAAGGATCTTTTTTTACCTTATTTTATTGAAAAAGTAAGTGTAAAAAATAGCGATGAGTTGCTTGTAAAATTAGAAGGTATTGAAACCCTGGAAACAGCCCGGAAACTTACTCCCCGGCCGGTGTGGCTTACACAAAACGATTTTAAAAAAGTAGCAGCCAAAGAAGCGCCTATCTCTTTATTGGGTTTTATGCTGGTAGATGGCAAAACAGAGTTGGGCGAAATTATTGAAGTTATTGAGCAGCCACACCAATTACTCTGTGCTATACAATATAAAGGTAAAGAAGCATTGATACCGGTTCATGAAGACAACCTGGTGAAACTAGACCAGCAGAAAAGGAAAGTGATCGTAAATATTCCGGAAGGATTATTGGAAATTTATACTTAA
PROTEIN sequence
Length: 178
LLSLQYMQHYIKIGKFVASHGIHGHLLLAHNLGKKTLLKNIQALFIEEKKDLFLPYFIEKVSVKNSDELLVKLEGIETLETARKLTPRPVWLTQNDFKKVAAKEAPISLLGFMLVDGKTELGEIIEVIEQPHQLLCAIQYKGKEALIPVHEDNLVKLDQQKRKVIVNIPEGLLEIYT*