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SCNpilot_BF_INOC_scaffold_5571_8

Organism: SCNpilot_BF_INOC_Chimera

partial RP 28 / 55 BSCG 26 / 51 ASCG 5 / 38
Location: 6285..7367

Top 3 Functional Annotations

Value Algorithm Source
Putative extracellular ligand-binding receptor n=1 Tax=Variovorax paradoxus B4 RepID=T1X4D3_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 82.1
  • Coverage: 386.0
  • Bit_score: 599
  • Evalue 2.90e-168
Putative extracellular ligand-binding receptor {ECO:0000313|EMBL:AGU47296.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 82.1
  • Coverage: 386.0
  • Bit_score: 599
  • Evalue 4.10e-168
putative extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 83.4
  • Coverage: 205.0
  • Bit_score: 329
  • Evalue 9.30e-88

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1083
ATGACCGTTCCCGTGCCGCGCGAGTCGATTGCGCCGCTTTCCACCAGCCGTCGCCGTGCGCTGACCGGACTGGCCGCAACCGCCGCCGCGGGCCTGGGATTTCCGGCGCTGGCGCAGAACAAGCCGGTTCGCGTCGGGACCACCTTCGACAACAGCAGCGTGGAGAAGGCCAACGGGCAGGGGCTTTACCAGGGTTCGAGCGCTTTCTTCGCGGCGCTGAACAAGGCCGGCGGCATCAACGGCACCAAGGTCGAGCTCGTGATGGCCGACGACACCTTCAAGCCCGATGTGGCCAAGGCCAACGCGCTGGCCTTCGAGAAGGACAGCTCGGTGCTCGCGCTGGTGCACCCGCTGGGCACGCGCCAGACGGCCGAAGTGATGGACGCGGTGCCGGGCATGGCCGTGGTCGGCCCCATCACCGGCACCATCTCGCTGCGCAAGAAGGCGTCGCCCAACACCTTCTGGGTGCGCGCCAACTACGACCAGGAAGTCGACAAGCTGGTGAGCACGGCCGCCGCCTCGCTGGCCAAGGCCAAGCTGGAGCCGGCGGTGATCGCCACCACGCCCAACACCACCAGCATGGAAGTCGGCCCCGCCGCCGCGGCCATCGCCAAGGCCAAGCCGCAGGTGGTGGTGGTCGGGTTGGCGGGCACGGCGCCGGTGTTCCTGAAGGCGCTGCGCGAGGCGGGCAACAGCAGTTCGGCCTACGGCCTGTCGATCACGGCCAGCGCGCTCGCGGCCATGGGCGACCTGGCGCGCGGCCTGGGCTTCGTGATCGTGGTGCCTTCGCCGTATTCGACCAAGTACGAGATCGTGCGCCGCTACCAGGCCGACATGGTGGCCAGCGGCATCAAGGAGTTCTCGCTCACCAGCCTGGAGGGCTACATGAACGCCGCCGTGCTGGCAGAGGGCATGCGCCGCGCGGGCGGTTCGCTGACGCGCGCGTCGGTGATGTCGGGGCTGGCCAGCATCGAGAGCTTCGACCTGGGCGGGGTGAAGATCAACTACGGCCGCACCAACCGCGAAGGCGGCCAGTTCGTGGACGTGGCCGTGATCGGCAGCCGCGGCCAGATGCTCAGCTAG
PROTEIN sequence
Length: 361
MTVPVPRESIAPLSTSRRRALTGLAATAAAGLGFPALAQNKPVRVGTTFDNSSVEKANGQGLYQGSSAFFAALNKAGGINGTKVELVMADDTFKPDVAKANALAFEKDSSVLALVHPLGTRQTAEVMDAVPGMAVVGPITGTISLRKKASPNTFWVRANYDQEVDKLVSTAAASLAKAKLEPAVIATTPNTTSMEVGPAAAAIAKAKPQVVVVGLAGTAPVFLKALREAGNSSSAYGLSITASALAAMGDLARGLGFVIVVPSPYSTKYEIVRRYQADMVASGIKEFSLTSLEGYMNAAVLAEGMRRAGGSLTRASVMSGLASIESFDLGGVKINYGRTNREGGQFVDVAVIGSRGQMLS*