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SCNpilot_BF_INOC_scaffold_12117_4

Organism: SCNpilot_BF_INOC_Rhodanobacter_69_30

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(1885..2376)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor n=1 Tax=Rhodanobacter denitrificans RepID=I4WY34_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 96.9
  • Coverage: 163.0
  • Bit_score: 307
  • Evalue 6.10e-81
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 96.3
  • Coverage: 163.0
  • Bit_score: 306
  • Evalue 5.00e-81
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGG88721.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; R similarity UNIPROT
DB: UniProtKB
  • Identity: 96.3
  • Coverage: 163.0
  • Bit_score: 306
  • Evalue 2.50e-80

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 492
GTGAATTCGAGCGACGCCGTGCGCGAAGGACTGATCCCGCTGTTGCCGCGCCTGCGCCGGCTGGCGCGGGCGCTGGCCGGCCAGGCCGCCGACGCCGACGACCTGGTGCAGATCGTGCTGGAGCGCGCGCTCGCTCGTGCCGCGCAGTGGCGGCCGGATGCCGCGCTGGATCGGTGGGTGTTCGCGATCGCACGCAATGCCTGGCGCGACGAACTGCGCGCGCGCGGCCGTTCGCAGCATCTGTTCGCGCCGGAGGAAGCCGGCGAGATGGCGGCCGACCGCGCCAGTGCGCAGCCGGCGCAGCAACTGGAACTGGCGATGGCGCTGGCGGCGCTGCCGCCGGACCATCGCGAAGTGGTGGCCCTGGTGCTGGTCGAGGGCATGTCCTACGGCGAGGCCGCCGAGCTGCTGGAGGTGCCGGTGGGCACCGTCACCAGTCGCCTGGCTCGCGCCCGCGCCACCTTGCAGGCCCACCTTGGGAAAGAAGCATGA
PROTEIN sequence
Length: 164
VNSSDAVREGLIPLLPRLRRLARALAGQAADADDLVQIVLERALARAAQWRPDAALDRWVFAIARNAWRDELRARGRSQHLFAPEEAGEMAADRASAQPAQQLELAMALAALPPDHREVVALVLVEGMSYGEAAELLEVPVGTVTSRLARARATLQAHLGKEA*