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SCNpilot_bf_inoc_scaffold_1693_curated

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_1693_curated_1
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..1311)
DNA (1311bp) protein (437aa)
Na+/H+ antiporter NhaD and related arsenite permease n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6ISU1_9PORP
Na+/H+ antiporter NhaD-like protein
Citrate transporter {ECO:0000313|EMBL:EFK63669.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
SCNpilot_bf_inoc_scaffold_1693_curated_2
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1492..3375
DNA (1884bp) protein (628aa)
ATP-binding cassette, subfamily F, uup n=2 Tax=Parabacteroides RepID=N2BAI2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB59640.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
ABC transporter ATP-binding protein; K15738 ATP-binding cassette, subfamily F, uup
SCNpilot_bf_inoc_scaffold_1693_curated_3
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3392..4567
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5ZZZ3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN16875.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
transmembrane transport protein
SCNpilot_bf_inoc_scaffold_1693_curated_4
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4733..5116
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5ZZK0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB45567.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1693_curated_5
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5303..5686
DNA (384bp) protein (128aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2BAH6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB59634.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1693_curated_6
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5814..6704
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5ZZY8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN16870.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1693_curated_7
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6810..8009
DNA (1200bp) protein (400aa)
aspartate transaminase (EC:2.6.1.1); K00812 aspartate aminotransferase [EC:2.6.1.1]
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5ZMB7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN16869.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
SCNpilot_bf_inoc_scaffold_1693_curated_8
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8013..9257
DNA (1245bp) protein (415aa)
Putative membrane protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IVS0_9PORP
Putative membrane protein {ECO:0000313|EMBL:CDB49476.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
transmembrane permease; K09808 lipoprotein-releasing system permease protein
SCNpilot_bf_inoc_scaffold_1693_curated_9
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9259..10467)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5YRW8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB45571.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
glycosyl transferase family protein
SCNpilot_bf_inoc_scaffold_1693_curated_10
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10609..11763)
DNA (1155bp) protein (385aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
diaminopimelate decarboxylase; K01586 diaminopimelate decarboxylase [EC:4.1.1.20]
Diaminopimelate decarboxylase n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5Y8J9_9PORP
SCNpilot_bf_inoc_scaffold_1693_curated_11
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11773..13092)
DNA (1320bp) protein (440aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
aspartokinase; K00928 aspartate kinase [EC:2.7.2.4]
Aspartokinase n=3 Tax=Parabacteroides RepID=K5ZDU2_9PORP
SCNpilot_bf_inoc_scaffold_1693_curated_12
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13185..13877)
DNA (693bp) protein (231aa)
ABC transporter, ATP-binding protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BDF6_9PORP
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEC95523.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
ATP-binding protein involved in cell division; K09812 cell division transport system ATP-binding protein
SCNpilot_bf_inoc_scaffold_1693_curated_13
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13890..14486)
DNA (597bp) protein (199aa)
bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase; K11755 phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase [EC:3.6.1.31 3.5.4.19]
Histidine biosynthesis bifunctional protein HisIE n=3 Tax=Parabacteroides RepID=K5Z203_9PORP
Histidine biosynthesis bifunctional protein HisIE {ECO:0000256|HAMAP-Rule:MF_01019, ECO:0000256|SAAS:SAAS00015509}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
SCNpilot_bf_inoc_scaffold_1693_curated_14
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14501..15160)
DNA (660bp) protein (220aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
imidazole glycerol phosphate synthase subunit HisF; K02500 cyclase [EC:4.1.3.-]
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZQE0_9PORP
SCNpilot_bf_inoc_scaffold_1693_curated_15
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15277..15996)
DNA (720bp) protein (240aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.
imidazole-4-carboxamide isomerase; K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Parabacteroides RepID=K5Y8J3_9PORP
SCNpilot_bf_inoc_scaffold_1693_curated_16
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16002..16592)
DNA (591bp) protein (197aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hisH; imidazole glycerol phosphate synthase subunit HisH; K02501 glutamine amidotransferase [EC:2.4.2.-]
Imidazole glycerol phosphate synthase subunit HisH n=2 Tax=Parabacteroides RepID=E1YYU3_9PORP
SCNpilot_bf_inoc_scaffold_1693_curated_17
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16600..17475)
DNA (876bp) protein (292aa)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:118.;"
formyltetrahydrofolate deformylase; K01433 formyltetrahydrofolate deformylase [EC:3.5.1.10] rbh
Formyltetrahydrofolate deformylase n=1 Tax=Tannerella sp. CAG:118 RepID=R5I6U0_9PORP
SCNpilot_bf_inoc_scaffold_1693_curated_18
Porphyromonas cangingivalis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18195..18968)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Porphyromonas macacae RepID=UPI0003626FCF
Uncharacterized protein {ECO:0000313|EMBL:KGN83246.1}; TaxID=36874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas cangingivalis.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1693_curated_19
unknown

Not on your lists

comp(18991..19104)
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1693_curated_20
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19429..20589)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=3 Tax=root RepID=I9TWE7_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY77603.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
receptor rbh
SCNpilot_bf_inoc_scaffold_1693_curated_21
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21378..21623
DNA (246bp) protein (82aa)
Uncharacterized protein {ECO:0000313|EMBL:CEA16976.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein PspoU_14883 id=3911703 bin=GWF2_Bacteroidetes_29_10 species=Pseudoalteromonas spongiae genus=Pseudoalteromonas taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
hypothetical protein
SCNpilot_bf_inoc_scaffold_1693_curated_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21625..21936
DNA (312bp) protein (104aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=E4VYA2_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EKA80883.1}; TaxID=1073388 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 616.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1693_curated_23
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22044..22370)
DNA (327bp) protein (109aa)
alkylphosphonate utilization operon protein phna; K06193 phosphonoacetate hydrolase [EC:3.11.1.2]
Alkylphosphonate utilization operon protein PhnA n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J1T4_9PORP
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_1693_curated_24
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22557..23657
DNA (1101bp) protein (367aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T559_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79853.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_1693_curated_25
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23966..24640
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis CAG:47 RepID=R6Z0I7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KKB57480.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1693_curated_26
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24789..25163)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Bacteroides finegoldii DSM 17565 RepID=C9L315_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEX43299.1}; TaxID=483215 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii DSM 17565.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1693_curated_27
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25331..25969
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Bacteroides finegoldii CL09T03C10 RepID=K5CLF2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKJ90170.1}; TaxID=997888 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii CL09T03C10.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1693_curated_28
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26277..26909
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Bacteroides finegoldii CL09T03C10 RepID=K5CLF2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKJ90170.1}; TaxID=997888 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii CL09T03C10.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1693_curated_29
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27105..27470
DNA (366bp) protein (122aa)
Putative uncharacterized protein id=3899469 bin=GWF2_Bacteroidetes_38_335 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
hypothetical protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_1693_curated_30
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27484..27885
DNA (402bp) protein (134aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
Peptidylprolyl isomerase n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RBB7_9BACE
FKBP-type peptidylprolyl isomerase
Displaying items 1-30 of 40 in total

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