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SCNpilot_bf_inoc_scaffold_316_curated

Search features with annotation key words

Displaying items 31-43 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_316_curated_31
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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38404..38979
DNA (576bp) protein (192aa)
superoxide dismutase (EC:1.15.1.1); K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Superoxide dismutase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0E9_PALPW
SCNpilot_bf_inoc_scaffold_316_curated_32
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(39078..41471)
DNA (2394bp) protein (798aa)
Putative uncharacterized protein id=3804437 bin=GWF2_Bacteroidetes_33_38 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
secreted protein with Por secretion system C-terminal sorting domain
Tax=GWF2_Bacteroidetes_33_38_curated
SCNpilot_bf_inoc_scaffold_316_curated_33
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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41758..43038
DNA (1281bp) protein (427aa)
methionine adenosyltransferase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6]
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 132
S-adenosylmethionine synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3T9_PALPW
SCNpilot_bf_inoc_scaffold_316_curated_34
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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43113..44909
DNA (1797bp) protein (599aa)
Putative uncharacterized protein id=2138017 bin=GWE2_Bacteroidetes_39_28 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes
alpha-glycosidase
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_316_curated_35
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(44906..47083)
DNA (2178bp) protein (726aa)
bifunctional trehalose-6-phosphate synthase/HAD hydrolase; K16055 trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
Trehalose-phosphatase id=1747127 bin=GWD2_Bacteroidales_45_23 species=Bacteroides caccae genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_316_curated_36
Psychroflexus gondwanensis, Psychroflexus, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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47243..47872
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Psychroflexus gondwanensis ACAM 44 RepID=N1WI34_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EMY79921.1}; TaxID=1189619 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Psychroflexus.;" source="Psychroflexus gondwanensis ACAM 44.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_316_curated_37
unknown

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48336..48428
DNA (93bp) protein (31aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_316_curated_38
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(48385..50397)
DNA (2013bp) protein (671aa)
UvrABC system protein B n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2U7_PALPW
excinuclease ABC subunit b; K03702 excinuclease ABC subunit B
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_316_curated_39
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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50568..51452
DNA (885bp) protein (295aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T418_PALPW
hypothetical protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_316_curated_40
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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51461..52897
DNA (1437bp) protein (479aa)
Polysaccharide biosynthesis protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T419_PALPW
polysaccharide biosynthesis protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_316_curated_41
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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53250..56714
DNA (3465bp) protein (1155aa)
Conserved domain protein n=1 Tax=Bacteroides clarus CAG:160 RepID=R6LHH3_9BACE
Conserved domain protein {ECO:0000313|EMBL:CDB81576.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
SCNpilot_bf_inoc_scaffold_316_curated_42
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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56941..58374
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5IHU3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCY36356.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:118.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_316_curated_43
Bacteroides reticulotermitis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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58741..59403
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00035FCAD7
Transcriptional regulator {ECO:0000313|EMBL:GAE86459.1}; TaxID=1445607 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides reticulotermitis JCM 10512.;"
AraC family transcriptional regulator
Displaying items 31-43 of 43 in total

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