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SCNpilot_bf_inoc_scaffold_405_curated

Search features with annotation key words

Displaying items 31-45 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_405_curated_31
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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27075..28541
DNA (1467bp) protein (489aa)
Permease YjgP/YjgQ family protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T344_PALPW
permease yjgp/yjgq family protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_405_curated_32
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28510..29766
DNA (1257bp) protein (419aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
Riboflavin biosynthesis protein RibBA n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T345_PALPW
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_405_curated_33
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29885..31738
DNA (1854bp) protein (618aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T347_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79141.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_405_curated_34
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31838..32140
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0S0_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78195.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_405_curated_35
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(32155..32751)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis CAG:558 RepID=R5R8S8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EYE42298.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
KilA-N, DNA-binding domain
SCNpilot_bf_inoc_scaffold_405_curated_36
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(32751..33335)
DNA (585bp) protein (195aa)
Uncharacterized protein n=2 Tax=Bacteroidetes RepID=F3XQ73_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHH01570.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
KilA-N, DNA-binding domain
SCNpilot_bf_inoc_scaffold_405_curated_37
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(33348..35960)
DNA (2613bp) protein (871aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
alanyL-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7]
Alanine--tRNA ligase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7X4_PALPW
SCNpilot_bf_inoc_scaffold_405_curated_38
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36312..37280
DNA (969bp) protein (323aa)
Peptidase M23 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7X5_PALPW
peptidase m23
Peptidase M23 {ECO:0000313|EMBL:ADQ80819.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_405_curated_39
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37424..39598
DNA (2175bp) protein (725aa)
RelA/SpoT family protein {ECO:0000313|EMBL:ADQ79622.1}; EC=2.7.6.5 {ECO:0000313|EMBL:ADQ79622.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
rela/spot family protein (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5]
RelA/SpoT family protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4H8_PALPW
SCNpilot_bf_inoc_scaffold_405_curated_40
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39576..40595)
DNA (1020bp) protein (340aa)
23S rRNA m(2)a-2503 methyltransferase (EC:2.1.1.-); K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4J3_PALPW
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_405_curated_41
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40694..42808)
DNA (2115bp) protein (705aa)
ppic-type peptidyL-prolyl cis-trans isomerase; K03770 peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4J4_PALPW
SCNpilot_bf_inoc_scaffold_405_curated_42
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42895..44148)
DNA (1254bp) protein (418aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4J5_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79639.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_405_curated_43
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

44676..46046
DNA (1371bp) protein (457aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036EC392
Uncharacterized protein {ECO:0000313|EMBL:EGN05339.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
glycoside hydrolase family protein
SCNpilot_bf_inoc_scaffold_405_curated_44
Prevotella sp. CAG:487, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

46146..47336
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:487 RepID=R5PCE3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ14220.1}; TaxID=1262928 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:487.;"
SCNpilot_bf_inoc_scaffold_405_curated_45
unknown

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47371..47610
DNA (240bp) protein (80aa)

This feature has no annotations

Displaying items 31-45 of 45 in total

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