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SCNpilot_bf_inoc_scaffold_135_curated

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Displaying items 31-60 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_135_curated_31
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

54354..56993
DNA (2640bp) protein (880aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:873 RepID=R7J672_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE58392.1}; TaxID=1262936 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_135_curated_32
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

57033..59567
DNA (2535bp) protein (845aa)
Uncharacterized protein n=1 Tax=Bacteroides nordii CL02T12C05 RepID=I9H256_9BACE
endonuclease/exonuclease/phosphatase; K07004
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_135_curated_33
Prevotella saccharolytica, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

59635..62088
DNA (2454bp) protein (818aa)
Uncharacterized protein n=1 Tax=Prevotella saccharolytica F0055 RepID=L1NK40_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKY03635.1}; TaxID=1127699 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella saccharolytica F0055.;"
copper amine oxidase domain-containing protein
SCNpilot_bf_inoc_scaffold_135_curated_34
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

62142..63035
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RV12_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA59892.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
SCNpilot_bf_inoc_scaffold_135_curated_35
Bacteroides nordii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

63032..65458
DNA (2427bp) protein (809aa)
Uncharacterized protein n=1 Tax=Bacteroides nordii CL02T12C05 RepID=I9SDA8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY53538.1}; TaxID=997884 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides nordii CL02T12C05.;"
SCNpilot_bf_inoc_scaffold_135_curated_36
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(65459..67129)
DNA (1671bp) protein (557aa)
Ribulokinase {ECO:0000256|HAMAP-Rule:MF_00520, ECO:0000256|RuleBase:RU003455}; EC=2.7.1.16 {ECO:0000256|HAMAP-Rule:MF_00520, ECO:0000256|RuleBase:RU003455};; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
ribulokinase; K00853 L-ribulokinase [EC:2.7.1.16]
ribulokinase id=4165680 bin=GWF2_Bacteroidetes_42_66 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
SCNpilot_bf_inoc_scaffold_135_curated_37
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(67142..68203)
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003759933
Uncharacterized protein {ECO:0000313|EMBL:EGK01272.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_135_curated_38
Prevotella saccharolytica, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(68217..71264)
DNA (3048bp) protein (1016aa)
hypothetical protein n=1 Tax=Prevotella nanceiensis RepID=UPI00035CECF4
BNR/Asp-box repeat protein {ECO:0000313|EMBL:EKY00979.1}; TaxID=1127699 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella saccharolytica F0055.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_135_curated_39
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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comp(71270..71890)
DNA (621bp) protein (207aa)
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_bf_inoc_scaffold_135_curated_40

Not on your lists

comp(71971..73407)
DNA (1437bp) protein (479aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1SIV5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC47266.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_135_curated_41
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(73472..75280)
DNA (1809bp) protein (603aa)
RagB/SusD domain protein n=2 Tax=root RepID=R6VPH8_9BACT
RagB/SusD domain protein {ECO:0000313|EMBL:CDC98945.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
RagB/SusD domain-containing protein
SCNpilot_bf_inoc_scaffold_135_curated_42
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(75292..78381)
DNA (3090bp) protein (1030aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Alistipes sp. CAG:268 RepID=R6VKA9_9BACT
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:CDC98943.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
hypothetical protein rbh
SCNpilot_bf_inoc_scaffold_135_curated_43
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(78443..80245)
DNA (1803bp) protein (601aa)
beta-N-acetylhexosaminidase; K12373 hexosaminidase [EC:3.2.1.52]
Glycosyl hydrolase family 20, catalytic domain protein n=5 Tax=root RepID=A7V767_BACUN
Putative beta-L-N-acetylhexosaminidase {ECO:0000313|EMBL:EFA21634.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
SCNpilot_bf_inoc_scaffold_135_curated_44
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(80356..82113)
DNA (1758bp) protein (586aa)
Por secretion system C-terminal sorting domain-containing protein {ECO:0000313|EMBL:KKB54744.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
SCNpilot_bf_inoc_scaffold_135_curated_45
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(82198..83724)
DNA (1527bp) protein (509aa)
hypothetical protein n=1 Tax=Lewinella persica RepID=UPI0003668C74
Uncharacterized protein {ECO:0000313|EMBL:EIY63997.1}; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salyersiae CL02T12C01.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_135_curated_46
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(83762..85441)
DNA (1680bp) protein (560aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 RepID=R0HFM1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA53420.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_135_curated_47
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(85577..87352)
DNA (1776bp) protein (592aa)
L-fucose isomerase {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040911}; Short=FucIase {ECO:0000256|HAMAP-Rule:MF_01254};; EC=5.3.1.25 {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040955};; 6-deoxy-L-galactose isomerase {ECO:0000256|HAMAP-Rule:MF_01254}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
L-fucose isomerase; K01818 L-fucose isomerase [EC:5.3.1.25]
L-fucose isomerase n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IZF5_9PORP
SCNpilot_bf_inoc_scaffold_135_curated_48
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(87395..88846)
DNA (1452bp) protein (484aa)
symporter n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237C689
L-fucose permease
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_135_curated_49
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(88857..90101)
DNA (1245bp) protein (415aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IZF2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01277.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_135_curated_50
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(90123..92192)
DNA (2070bp) protein (690aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IZF3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01278.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_135_curated_51
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(92219..93382)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Bacteroides cellulosilyticus CAG:158 RepID=R6KMS2_9BACE
hypothetical protein
Tax=GWB2_Bacteroidetes_41_8_curated
SCNpilot_bf_inoc_scaffold_135_curated_52
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(93465..94454)
DNA (990bp) protein (330aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IZE8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01273.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
SCNpilot_bf_inoc_scaffold_135_curated_53
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(94628..95524)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI00037F4850
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG58622.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
SCNpilot_bf_inoc_scaffold_135_curated_54
Coprobacter sp. 177, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

95815..97299
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5I6E9_9PORP
Potassium transporter {ECO:0000313|EMBL:KHM45143.1}; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter sp. 177.;"
sodium/hydrogen exchanger; K11105 cell volume regulation protein A
SCNpilot_bf_inoc_scaffold_135_curated_55
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(97301..97870)
DNA (570bp) protein (190aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
phosphoribosylglycinamide formyltransferase; K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035DA064
SCNpilot_bf_inoc_scaffold_135_curated_56
Bacteroides sp. CAG:875, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

98021..98251
DNA (231bp) protein (77aa)
Acyl carrier protein n=1 Tax=Bacteroides sp. CAG:875 RepID=R6ZHN3_9BACE
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1262752 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:875.;"
acyl carrier protein; K02078 acyl carrier protein
SCNpilot_bf_inoc_scaffold_135_curated_57
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

98273..99535
DNA (1263bp) protein (421aa)
3-oxoacyL-(acyL-carrier-protein) synthase ii (EC:2.3.1.41); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6E7_PALPW
SCNpilot_bf_inoc_scaffold_135_curated_58
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

99537..100313
DNA (777bp) protein (259aa)
ribonuclease iii (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3]
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Ribonuclease 3 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6E6_PALPW
SCNpilot_bf_inoc_scaffold_135_curated_59
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

100355..102151
DNA (1797bp) protein (599aa)
amp-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
AMP-dependent synthetase and ligase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6E5_PALPW
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ADQ80289.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_135_curated_60
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

102320..102517
DNA (198bp) protein (66aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6E4_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ80288.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Displaying items 31-60 of 78 in total

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