ggKbase home page

SCNpilot_bf_inoc_scaffold_2600_curated_7

Organism: scnpilot_dereplicated_Bacteroidales_1

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: 7554..10403

Top 3 Functional Annotations

Value Algorithm Source
HsdR family type I site-specific deoxyribonuclease; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] similarity KEGG
DB: KEGG
  • Identity: 70.8
  • Coverage: 972.0
  • Bit_score: 1373
  • Evalue 0.0
type I deoxyribonuclease HsdR n=1 Tax=Flexithrix dorotheae RepID=UPI00036044EB similarity UNIREF
DB: UNIREF100
  • Identity: 71.3
  • Coverage: 952.0
  • Bit_score: 1390
  • Evalue 0.0
Deoxyribonuclease HsdR {ECO:0000313|EMBL:KFF06319.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.5
  • Coverage: 958.0
  • Bit_score: 1382
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavobacterium reichenbachii → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2850
ATGACTACTCAACCGGAACAAGTGTTGGAAAATAATTTGGTGACTCAGCTTCAGCTGTTGGGTTATACGTATGTGCCTATTAAAGATGAAAAGGATTTGTTGGGCAATTTGAAATTGCAGTTGGAAAAGCACAACGGAATTGTATTTACCGAGTTGGAGTTTCAGCGGGTACTGAATATCTTAAGTAAAGGTTCTGTATTCGACAAGGCAGTTACTCTGCGTGAGAAACAGCATATTGTACGGGATAATGGGGAGGATTTGTATTTCGATTTCTTGAATCAGGAGAATTGGTGTCAGAATTTGTTCCAGGTTACCAACCAGGTTACTATGGAGGGAAAGTATAAAAACAGGTACGATGTTACTTTGTTGATTAACGGGTTGCCATTGGTACAGATAGAACTGAAACGCAGGGGAATTGAACTGAAGGAGGCCTTTAATCAGACCAATCGCTACCAGCGTCATTCCTACGGGGCTTCGTTGGCTTTGTTTCAGTTTATTCAGATTTTTGTTATCTCCAACGGTGTGAATACAAAGTATTATGCCAACAATAAATCGCAGTCGTTTAAGCAGACGTTCTTTTGGAGCGATTCCAATAATAAGTTGATTACGCAGCTCGACAAGTTTACATTTTCATTTCTGGATACCTGCCATGTGTCTAAAATGATATGCAAGTATATTGTATTGAATCAGACGTATAAGGTGCTGATGGTGTTAAGGCCTTATCAGTATTATGCGGTGGAGGCTTTGATAGATAGGGTTAAAAACTCTACAAAGAATGGGTATATCTGGCATACTACGGGTTCGGGTAAGACGCTTACCTCCTTTAAGGCGAGTCAGATTATCATGAATATGCCGGAGGTTAAGAAGGTAGTATTCGTGGTGGATCGCAGGGATTTGGATTACCAGACTTCCAAGGAGTTTAATGGTTTCAGCAAGGGGAGTGTAGATAGTACCGAAAGCACGGATATTTTGGTTCGCCAGCTTGAAGATAATACCAAACTTATCGTTACCACCATTCAGAAATTGAATACGGCTATCAGCAAGAAGCGCCACGAGTATCGGCTGAAGTCGGTCAAGAGTGAACGGATTATTTTCATTTTTGACGAGTGTCATCGGAGCCAGTTTGGTGAGACGCACAAGCGGATTGAGAATTATTTTGAGGATACGCAGTTCTTTGGCTTTACTGGTACTCCCATTTTTGCGGATAATGCCGTTAAAAATGAGCATGGCAAGCGTACAACCCATGAATTGTTTGGCGAGTGCTTACATAAATACGTGATTACGGATGCCATAAAGGATGAGAATGTGCTGAAGTTTTCGGTGGAGTATGTAGGGCGTTACCAAAATAAGGATGGGAGCAGGACTAATATTGATATTGAGGTTGAAGATATTGACAGAGAGGAGTTGATGCGGTCGCCGGCTCGACTTGGCAAGATTGCGGACTATATTGTGGCCAACCACGACCGTAAAACGCACAGCAGGGAATTTACGGCTATGTTTTGTGTGAGCAGTGTGGATGTGCTTATCCAGTATTATGAATTGTTTAAGTCAAAAAAGAAGGCGGGAGAGCATAATCTGCGTATTGCAACGATATTTAGTTATGCGGCTAATGAAGCCGACCGAGATGCTGACGGGTTTCTACCCGAGGAGGTTTCTGTTGTGGAGGAGGCAAAGGCTTTGTATGGATTGAATGTGCATAGCCGCGAGAAGTTGGACGAGTTTATTGAAGATTATAACGGCATGTTCCAAACAAATTTCTCTACCCGGGATAGTGTATCGTTTTATAATTACTACAATGATATTTCAAAGCGTGTAAAGGCTCGTGAGATTGATATTCTGTTGGTTGTTAATATGTTTCTAACAGGTTTCGACAGTAAGCCGCTTAATACTTTGTACGTGGACAAGAACTTGAAGTTCCATGGTTTGATTCAGGCTTATTCGCGTACCAATCGTGTGCTGAACGAACAGAAGTCGCAGGGCAATATAGTGGTGTTCCGTAACTTGAAGCAGGCTACAGATGATGCGATTACTTTGTTTAGCAACAAGGATGCGAGGGAAGTGATTTTAATGGAGCCTTATGAAGATTATGTAAAGCGGTTTGAAGCTGCTTTCGAGCATTTGCAGCAGGTTACTCCTACGGTTGATAGTGTTAATGATTTGCAAAGTGAAGAGGAGGAGCTGGAGTTTGTTAAGGCGTTCCGCGAAGTGATGCGGGTGAAAAATGTGCTGACTACTTTCTCTGATTTCTGCTTTGAGGATCTGCCCATGGATGAGCAGCTTTTTGATGATTACAAAAGTAAGTACCTCGATTTGCATGATAAGGTTAAGTCTGATTCGCAAAAGGAGAAAGTTTCTATTCTGGATGATGTGGATTTTGAGTTGGAACTGATTCATAAAGATGAAATCAATGTGGTTTACATCCTGAAGTTATTGGCCAATTTAAAGGATAATCCCGACAAAGAGAGGCGCCATGCGGAGATTGTTAAACTGATTGCGGGTGAGACGCAGCTCCGGAGCAAACGTGAACTGATTGAGAAGTTTATTCGTGAGAATTTGCCTGCTATTGAGGATTCGGATGCCATCCCGGATGCTTTCGAGCGTTTTTGGACAGAAGAACAACAGCAGGCCTTCATGAAGTTGTGCTCCGATGAAAACCTGCTGTTTGATAAGGTTGAAAAAATCATTTCCGATTACATATTCACCCAACGTGAACCGCTTAGGGATGAAATCCTGAAGTTACGCAACGATGGAAATCCACCTGTTAAAGAGCGTAAATTGGTAAGCGAACGCATCCTGAGTAAGATTAAAGGTTTCTTCGATACCTTTATTTCCGGAATGGGGGTGGAGTAA
PROTEIN sequence
Length: 950
MTTQPEQVLENNLVTQLQLLGYTYVPIKDEKDLLGNLKLQLEKHNGIVFTELEFQRVLNILSKGSVFDKAVTLREKQHIVRDNGEDLYFDFLNQENWCQNLFQVTNQVTMEGKYKNRYDVTLLINGLPLVQIELKRRGIELKEAFNQTNRYQRHSYGASLALFQFIQIFVISNGVNTKYYANNKSQSFKQTFFWSDSNNKLITQLDKFTFSFLDTCHVSKMICKYIVLNQTYKVLMVLRPYQYYAVEALIDRVKNSTKNGYIWHTTGSGKTLTSFKASQIIMNMPEVKKVVFVVDRRDLDYQTSKEFNGFSKGSVDSTESTDILVRQLEDNTKLIVTTIQKLNTAISKKRHEYRLKSVKSERIIFIFDECHRSQFGETHKRIENYFEDTQFFGFTGTPIFADNAVKNEHGKRTTHELFGECLHKYVITDAIKDENVLKFSVEYVGRYQNKDGSRTNIDIEVEDIDREELMRSPARLGKIADYIVANHDRKTHSREFTAMFCVSSVDVLIQYYELFKSKKKAGEHNLRIATIFSYAANEADRDADGFLPEEVSVVEEAKALYGLNVHSREKLDEFIEDYNGMFQTNFSTRDSVSFYNYYNDISKRVKAREIDILLVVNMFLTGFDSKPLNTLYVDKNLKFHGLIQAYSRTNRVLNEQKSQGNIVVFRNLKQATDDAITLFSNKDAREVILMEPYEDYVKRFEAAFEHLQQVTPTVDSVNDLQSEEEELEFVKAFREVMRVKNVLTTFSDFCFEDLPMDEQLFDDYKSKYLDLHDKVKSDSQKEKVSILDDVDFELELIHKDEINVVYILKLLANLKDNPDKERRHAEIVKLIAGETQLRSKRELIEKFIRENLPAIEDSDAIPDAFERFWTEEQQQAFMKLCSDENLLFDKVEKIISDYIFTQREPLRDEILKLRNDGNPPVKERKLVSERILSKIKGFFDTFISGMGVE*