ggKbase home page

SCNpilot_bf_inoc_scaffold_767_curated_20

Organism: scnpilot_dereplicated_Bacteroidales_1

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: 18372..19688

Top 3 Functional Annotations

Value Algorithm Source
Probable cell surface protein (Leucine-rich repeat protein) n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GW17_FLAPJ similarity UNIREF
DB: UNIREF100
  • Identity: 33.5
  • Coverage: 310.0
  • Bit_score: 157
  • Evalue 2.70e-35
cell surface leucine-rich repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 33.5
  • Coverage: 310.0
  • Bit_score: 157
  • Evalue 8.60e-36
Probable cell surface protein (Leucine-rich repeat protein) {ECO:0000313|EMBL:CAL42290.1}; TaxID=402612 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.5
  • Coverage: 310.0
  • Bit_score: 157
  • Evalue 3.80e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavobacterium psychrophilum → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1317
ATGAATAAGAGATTATTTCTTTTTGCATTATCCTTATTTGTCTTTTCAGGACAAATAAAAGCATATGATTTTGTGGTTAATGGTATGTCATTTAATGTGCTTTCAATTTCCAATTTAACTGCATCACTCGCGTCTATTGATAATAGTGTTGCAAGAGATTTCATTGTGCCTTCAACAGTTGAGTATGCTGGTAAAACTTTATCTGTAACGACAATCGATACAAGATGTTTTACTCCACGTACATTATCATCTATAACAATTCCTAATACAATTTCTACAATTTATGAAGCCGCATTTACGGATTTGATAGTCGATTCAATAATATTTCAAGAAGGGACGGAACTCCTTACAATTGGAGGAGGATACATATCATGTTTTGTAGGTCAATTTGATGATGGACATGTTGGTAAAGTTTTTATAGGTAGGGATATTAACTATACAAATCAATATTCCTCATCATTATTTGGGACAACCTATCTAAAATCTGTAGAATTTGGTGCAAATGTAACTTCTATTTGTAAGCGAGCTTTTTCAAATGCGTCAAATTTAGAATATGTTATTTTGCCAAAAAATCTTGAGAGCATTGGTGACTTAGCTTTTAGTGGATGTGCCATTTTAAAAAGTATAAATCTTCCCCAATCTGTCACTCATATTGGAGGCGGTGCTTTTTATGGTACAGGACTTGATTCATTATATATCCCCGAACAAGTCTTAGTTGTCGAAAGTATGTTATTTCGAGAATGTTCAAAACTGAAGAAAGTCAATATACCTAATAAAGCGACTCAAATTGGTCAATATGCTTTTAACAATTGTAAAAGTCTAAAAGAAATAGTAATACCAGAAAGTGTTTCATCTATTGGAAAAATTGCATTTAAGGGATGTGATAGTCTTCATTCAATTACTATACTTAATCCAACTCCAATAACAATAACGGATGATGTTTTTTCAGTATCTTCATATTGGGATGGCGTTCTATATGTTCCATTTTCAAGTAAACAGCTTTATTCAACAACGGTACCTTGGAGTAATTTTCAAAAGATTGAGGGAGTTACATCAACAGAAGTTTTTAATACAAAAATTGAATATATTACTCCATACCCAAACCCTACTTCTTCAATCTTAAACTTAGATTTTGGTGATATTATCGGATCCAGGTGCCTAATGATTTTTAACTCCTTGGGGCAGCAAGTATATGAATCAAAGATTAATGAAAATGCATTTAAACTTGATGTATCAAATTTTCCTAATGGATTATATTTTATCCGAGTAAGAAATGAGAATAATATACAAAGCATGGCAAGGTTTATTAAAAATTGA
PROTEIN sequence
Length: 439
MNKRLFLFALSLFVFSGQIKAYDFVVNGMSFNVLSISNLTASLASIDNSVARDFIVPSTVEYAGKTLSVTTIDTRCFTPRTLSSITIPNTISTIYEAAFTDLIVDSIIFQEGTELLTIGGGYISCFVGQFDDGHVGKVFIGRDINYTNQYSSSLFGTTYLKSVEFGANVTSICKRAFSNASNLEYVILPKNLESIGDLAFSGCAILKSINLPQSVTHIGGGAFYGTGLDSLYIPEQVLVVESMLFRECSKLKKVNIPNKATQIGQYAFNNCKSLKEIVIPESVSSIGKIAFKGCDSLHSITILNPTPITITDDVFSVSSYWDGVLYVPFSSKQLYSTTVPWSNFQKIEGVTSTEVFNTKIEYITPYPNPTSSILNLDFGDIIGSRCLMIFNSLGQQVYESKINENAFKLDVSNFPNGLYFIRVRNENNIQSMARFIKN*