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SCNpilot_bf_inoc_scaffold_316_curated_7

Organism: scnpilot_dereplicated_Bacteroidales_1

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: comp(7381..8211)

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter sp. 177.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 275.0
  • Bit_score: 344
  • Evalue 1.10e-91
dapF; diaminopimelate epimerase; K01778 diaminopimelate epimerase [EC:5.1.1.7] similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 276.0
  • Bit_score: 340
  • Evalue 4.50e-91
Diaminopimelate epimerase n=1 Tax=Azobacteroides pseudotrichonymphae genomovar. CFP2 RepID=DAPF_AZOPC similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 276.0
  • Bit_score: 340
  • Evalue 1.40e-90
  • rbh

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Taxonomy

Coprobacter sp. 177 → Coprobacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 831
ATGAAATTTACAAAGATGCAAGGTACAGGCAATGATTATGTATATATTGACTGTTTTAAGGAAGATGTTGCTTCTCCCGAATTGTTAGTTGCCAAGATAAGTGACCGGCATAAAGGTATTGGTTCGGACGGACTTGTGCTCATCATGCCTTCTGCTGTTGCTGATTTCCGTATGAGAATGTTTAATCCCGATGGCTCTGAGTCGCAGATGTGTGGAAATGCATCTCGATGCGTTGGTAAGTTTGTGTATGATAAGAAGTTGACAGACAAAACGGAGATTTTATTAGATACAAATGCCGGAATTAAGTTTCTCAAACTGATTCCCAATCAATATGGTCAAATAGAGAGAGTTTGTGTTAATATGGGTGAACCTGTTCTTGTTGCAGAAGAAATTCCGGTAACTTTTTCAGGTAAAATGATGATAAACGAACAAATTAATTTTGAACCGGAGCTGTACAATATAACCTGTGTTTCGATGGGTAATCCTCACACCATAATTTTTACTGATAACATTAATAAGCTGAAATTGGAAAAAATCGGTAGAAAAATTGAGAATTTCAGACTGTTCCCTGAGCGAACAAATGTAGAATTTGTTGAGATAATTTCTCCTTACAGAGCAAATGTGAGGGTTTGGGAGCGTGGTGCAGGTGAGACACAAGCCTGCGGTACAGGTGCTTGTGCAGTGTTAGTCGCCGGAGTGTTGAATGGAGTTCTTGATCGTCAAGCAATTATTCAATTGCCGGGTGGAGAATTACAAATTGAATGGCGTGAAAGCGATAATTGCGTTTATATGACGGGCGACGCAGTAACGGTGTTTGAGGGGGAGTGGTGA
PROTEIN sequence
Length: 277
MKFTKMQGTGNDYVYIDCFKEDVASPELLVAKISDRHKGIGSDGLVLIMPSAVADFRMRMFNPDGSESQMCGNASRCVGKFVYDKKLTDKTEILLDTNAGIKFLKLIPNQYGQIERVCVNMGEPVLVAEEIPVTFSGKMMINEQINFEPELYNITCVSMGNPHTIIFTDNINKLKLEKIGRKIENFRLFPERTNVEFVEIISPYRANVRVWERGAGETQACGTGACAVLVAGVLNGVLDRQAIIQLPGGELQIEWRESDNCVYMTGDAVTVFEGEW*