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SCNpilot_bf_inoc_scaffold_261_curated_25

Organism: scnpilot_dereplicated_Bacteroidales_1

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: 32434..33111

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase d (EC:5.4.99.-); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] similarity KEGG
DB: KEGG
  • Identity: 74.7
  • Coverage: 225.0
  • Bit_score: 357
  • Evalue 2.90e-96
Ribosomal large subunit pseudouridine synthase D {ECO:0000313|EMBL:ADQ78854.1}; EC=5.4.99.- {ECO:0000313|EMBL:ADQ78854.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.7
  • Coverage: 225.0
  • Bit_score: 357
  • Evalue 1.30e-95
Ribosomal large subunit pseudouridine synthase D n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2B0_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 74.7
  • Coverage: 225.0
  • Bit_score: 357
  • Evalue 9.20e-96

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Taxonomy

Paludibacter propionicigenes → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 678
ATGGAAATAATTTACGAAGATAACCATATAATTGCAGTCAATAAATCCTCATCTGAGATTGTACAAGGCGATAAAACGGGCGATGAACCACTTTCTGAAAGTGTAAAAAACTATATTAAAGAAAAATATAATAAGCCGGGGGAAGTATTTCTTGGTGTTACTCATCGATTAGATCGTCCGGTGAGTGGGGTAGTGCTGTTTGCTCGCACAAGTAAGTCATTAACACGATTAAATGAAATGTTTAAGACTCAGCAAATCAAGAAAATATACTGGGCGATAGTTAAACAAGTTCCCGAAAGTACAGAGAATACTTTAGTACATTATTTAGTGCGTAATGAAAAACAGAACAAATCATATGCTTACGACAAAGAAGTACCAAATTCAAAGAAAGCTATATTAAAATACAGATTGTTAGGTCATTCCGATAAATACCATTTGCTTGAAGTTCAATTAGAAACCGGTCGTCACCACCAGATAAGATGTCAGCTTGCCAAAATAGGTTCTGCTATCAAAGGCGATTTAAAATATGGCTTCCCACGCTCAAACCCTAATGGAGGTATTTCTCTACATGCTCGTTATGTTGAATTTATTCATCCTGTTTCAAAAGAACTGATTAAAATAACAGCACCGGTACCAAAAGAAGATAAAATTTGGGAAGTGTTTGAAAATTTATCTTAA
PROTEIN sequence
Length: 226
MEIIYEDNHIIAVNKSSSEIVQGDKTGDEPLSESVKNYIKEKYNKPGEVFLGVTHRLDRPVSGVVLFARTSKSLTRLNEMFKTQQIKKIYWAIVKQVPESTENTLVHYLVRNEKQNKSYAYDKEVPNSKKAILKYRLLGHSDKYHLLEVQLETGRHHQIRCQLAKIGSAIKGDLKYGFPRSNPNGGISLHARYVEFIHPVSKELIKITAPVPKEDKIWEVFENLS*