ggKbase home page

SCNpilot_bf_inoc_scaffold_261_curated_68

Organism: scnpilot_dereplicated_Bacteroidales_1

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: 63333..64991

Top 3 Functional Annotations

Value Algorithm Source
Phage shock protein C, PspC n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T065_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 40.8
  • Coverage: 564.0
  • Bit_score: 450
  • Evalue 3.30e-123
phage shock protein c, pspc similarity KEGG
DB: KEGG
  • Identity: 40.8
  • Coverage: 564.0
  • Bit_score: 450
  • Evalue 1.10e-123
Phage shock protein C, PspC {ECO:0000313|EMBL:ADQ78255.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.8
  • Coverage: 564.0
  • Bit_score: 450
  • Evalue 4.70e-123

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Paludibacter propionicigenes → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1659
ATGAAACGAACACTTACCATTAATCTTAATAATACGGTTTACCATATTGACGATGACGCATATGAATTGTTAAAGAAGTATTTGCATGATGTCGAATCCAGATTATCACCTGACGAAAGAAAAGAGGTTATGATAGATGTGGAAATTCGAATATCCGAACTGTTTAATGTCCGATTAATCAGAGGAAAAAGTGTAATAAACAAGAGCGATGTCGAAGAGATAATTAAAGTCTTGGGTAAACCAAATGAATTTGACGAAGAGGGTAGTACGGGCTCAAGTACTTCTTTCGACAAGAAAAACAGGAAGTTTTATAGAGATGTAGATAATTCGATTTTAGGTGGAGTTGCATCAGGCTTAGCAGCATTAATTGGATGGGATGTAGTTATTGTTCGCCTAATATTCGTTTTGATATTGTTTTTTGGATGGGGAACTATCATTCCGATTTATTTAGTATTATGGCTAATAGTTCCGCCGGCAAAAACTATTTCTCAAAAACTTGAAATGCATGGTGAAAACGTTACTACTGAAAGGATTAAAGAAGAGATAAACAATCTGAAAAACTATGTCGAAAGCGATAAGTTTAAAAGTTCGGCTCAAAGCATAGGAAGCAAAATAGGTGAAATATTTCAAGCTTTTTTTCAAGTGATTTTTGCAATCATCGGTAGTTTGATGGGCTTTGTCGGCTTTGTCCTTTTATGTGTGTTTTTATTGCTTTTAGTATTATGGATTTTCGAACCTTCATTAATAGCCGGTTTTATACCACCAAATCTGATAGTTTTTTCACCTGATAGAGCTACTTTAATGATAACCACATTAGTACTGATTATAGGTATACCTATATTTATGCTGATATTCTGGGCAATAAAAATTTTAAGTGGTAGAGGTAGTAAAGGTTCTGCTTTAAGTTGGATTTTAATAATACTTTGGTTTATAGGTATATTTATTTTCTTTGGATTAAGCGCAAGAACTATAGTGAATTTAGGTCAAAATAGTTTTAGAGCACTTGAGTTTTATGTTGTAGATGACTCAGAAGGTAATGTTGATGAAGTAAGATCTGTTGATCCTTTCAATTCTATTGATGTTTCAGGAAATTTTAATATTGATATAAGACAAGATAGCATTCAGTATTTACAAATAAGTACACAGCCATCTCTTTTACCGTATGTTTCAGCCGAAGTAGATAACAATGGTGTTTTAAACATATATACAACCAAATTAAACATAACAAAACCTGTTCGGATAAGGGTTAGCGTACCAAAGATTGTAAATCTATCAGCTAATGGTGCAAGTAAAATTACATCATTTGGGCAGATTTCCGGAGAAAATATGACAGTGAAGCTGACCGGTGCAAGTGCTTCTAAATTAGATTTAAAGTTAAGTAATGAATTAAAAATGAGTGTAATTGGTGCGTCACAAGCAGAAATTGATGGTTCGGCGCACAGACTGTTTGCTGATGTTTCGGGAGCTTCTAATTTGGATGCTGATGATTTCAAAGCGACTAATGCAAAAGTTTATGGTAGCGGTGCAAGTAAAATAAGTGCAAATGTATATGACTCTCTTTTTGTGGATGTCAGTGGAGCAAGCAGTTTTAAATCAGAAAGAAGACCGCTGCATTTAAGTCAAAGTAAATCAGGGGCTTCTAAGATTAGATTTAGATAA
PROTEIN sequence
Length: 553
MKRTLTINLNNTVYHIDDDAYELLKKYLHDVESRLSPDERKEVMIDVEIRISELFNVRLIRGKSVINKSDVEEIIKVLGKPNEFDEEGSTGSSTSFDKKNRKFYRDVDNSILGGVASGLAALIGWDVVIVRLIFVLILFFGWGTIIPIYLVLWLIVPPAKTISQKLEMHGENVTTERIKEEINNLKNYVESDKFKSSAQSIGSKIGEIFQAFFQVIFAIIGSLMGFVGFVLLCVFLLLLVLWIFEPSLIAGFIPPNLIVFSPDRATLMITTLVLIIGIPIFMLIFWAIKILSGRGSKGSALSWILIILWFIGIFIFFGLSARTIVNLGQNSFRALEFYVVDDSEGNVDEVRSVDPFNSIDVSGNFNIDIRQDSIQYLQISTQPSLLPYVSAEVDNNGVLNIYTTKLNITKPVRIRVSVPKIVNLSANGASKITSFGQISGENMTVKLTGASASKLDLKLSNELKMSVIGASQAEIDGSAHRLFADVSGASNLDADDFKATNAKVYGSGASKISANVYDSLFVDVSGASSFKSERRPLHLSQSKSGASKIRFR*