ggKbase home page

SCNpilot_bf_inoc_scaffold_278_curated_73

Organism: scnpilot_dereplicated_Bacteroidales_1

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: 87536..88063

Top 3 Functional Annotations

Value Algorithm Source
transcription elongation factor GreA n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029A6536 similarity UNIREF
DB: UNIREF100
  • Identity: 72.7
  • Coverage: 154.0
  • Bit_score: 224
  • Evalue 9.50e-56
transcription elongation factor grea; K03624 transcription elongation factor GreA similarity KEGG
DB: KEGG
  • Identity: 74.2
  • Coverage: 151.0
  • Bit_score: 223
  • Evalue 3.90e-56
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=880074 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella viscericola DSM 18177.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.8
  • Coverage: 156.0
  • Bit_score: 223
  • Evalue 1.70e-55

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Barnesiella viscericola → Barnesiella → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 528
ATGAAGTCGGAATTCTTTTTTGTTTTACTTATAGAAAAATATTTTGGAGGTTTTATTATGGCAGTTACTTACATGTCGGAAGCGGGTTACAATAAATTAAAAGAAGATTTATATCAATTAGAAAAGGTACAAAGACCTGCTATTTCAAAACAGATTGCAGAGGCACGTGACAAGGGAGATTTGTCGGAAAATGCCGAATATGACGCTGCTAAAGAGGCTCAGGGTCTTCTTGAAATGAAAATCGGACAGATAAAAGAGACTTTAGCTTCAGCACGTCTGATTGATGAATCCAAAATCACTACAAGTGAAGTCCAGATTCTTAATAAAGTGACCATTAAAAATACTAAGACAGGACAAGTAATGTCGTATACAATTGTGTCGGAGAGTGAAGCTAATCTGAAAGAAGGAAAAATTTCAGTAACAACTCCTATTGCTAAGGGTTTGTTAGGTAATAAAGTTGGAGATAAGGTAAATGTGCAAGTACCTTCAGGTATGATTGAATTTGAGATATTAGATATTTCTTTATAA
PROTEIN sequence
Length: 176
MKSEFFFVLLIEKYFGGFIMAVTYMSEAGYNKLKEDLYQLEKVQRPAISKQIAEARDKGDLSENAEYDAAKEAQGLLEMKIGQIKETLASARLIDESKITTSEVQILNKVTIKNTKTGQVMSYTIVSESEANLKEGKISVTTPIAKGLLGNKVGDKVNVQVPSGMIEFEILDISL*