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SCNpilot_bf_inoc_scaffold_12419_curated_2

Organism: scnpilot_dereplicated_Bacteroidales_1

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: comp(352..705)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=1 Tax=Weeksella virosa (strain ATCC 43766 / DSM 16922 / JCM 21250 / NBRC 16016 / NCTC 11634 / CL345/78) RepID=F0P030_WEEVC similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 105.0
  • Bit_score: 89
  • Evalue 3.20e-15
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 105.0
  • Bit_score: 89
  • Evalue 1.00e-15
Helix-turn-helix domain protein {ECO:0000313|EMBL:ADX67377.1}; TaxID=865938 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Weeksella.;" source="Weeksella virosa (strain ATCC 43766 / DSM 16922 / JCM 21250 / NBRC; 16016 / NCTC 11634 / CL345/78).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.7
  • Coverage: 105.0
  • Bit_score: 89
  • Evalue 4.50e-15

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Taxonomy

Weeksella virosa → Weeksella → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 354
ATGAAAGTCCGGTTAGAAAAAATAAAAAACCTGCGGTTACAAAAAGGCTGGTCACAAGAAAATATGGCTAATGAATTAGGGATCACCCAGCCCCAGTACGGAAGACTTGAAAACGGAGAAAATGAATTTGACTTCGGCAAACTAACCAGGATTGTAGAGATTTTCCAAGTGAACCCACTTGATATTATAGAGTTGGAAGAACAACAGGTTTATATAAATTCCGCCAATAGGGGAATTATAGGAAATAATTCTACATATATAGGAACACCATTATCAAAAGAAGAAATTATACAGATCGTACAGGAGGAAGTAAGCCGTCTCCTGCGCCATAAAAGTGTGGGAACAGAACGCTAG
PROTEIN sequence
Length: 118
MKVRLEKIKNLRLQKGWSQENMANELGITQPQYGRLENGENEFDFGKLTRIVEIFQVNPLDIIELEEQQVYINSANRGIIGNNSTYIGTPLSKEEIIQIVQEEVSRLLRHKSVGTER*