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SCNpilot_bf_inoc_scaffold_624_curated_31

Organism: scnpilot_dereplicated_Bacteroidales_1

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: comp(38313..39056)

Top 3 Functional Annotations

Value Algorithm Source
shikimate 5-dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25] similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 247.0
  • Bit_score: 446
  • Evalue 4.00e-123
Shikimate 5-dehydrogenase n=3 Tax=Parabacteroides RepID=K5YRW5_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 86.6
  • Coverage: 247.0
  • Bit_score: 452
  • Evalue 3.00e-124
Shikimate 5-dehydrogenase {ECO:0000313|EMBL:KKB59621.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.0
  • Coverage: 247.0
  • Bit_score: 452
  • Evalue 4.20e-124

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Taxonomy

Parabacteroides gordonii → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 744
ATGCAAAAATACGGTTTAATAGGCTACCCTCTCAGCCATTCATTTTCTAAAGCTTACTTTAATCAAAAGTTTGAAATTGAAAAGATTGATGCTGAATATGTTAACTTTGAGATTCCAAATATCAAAGAATTTAAAAATGTTATAAAGGAAAACCCTGATTTGTGCGGTCTAAACGTTACTTTACCCTATAAAACGCAAATAATACCACTATTGGATGACATCGACGAAGATGCCAGACTCATTGGTGCTGTTAATGTGATAAAATTCAGTAAAGGTTTTTTTGGCAAAACCAAACTAAAGGGATACAATTCGGATATTATAGGATTCAAGAAGTCGATTGAGCCTTTATTGAATGACACCCATCGTAAGGCTTTGATCTTAGGAACCGGGGGTGCTTCGAAAGCCGTTTTCCAGGGGTTAAAACAAATGGGGGTCGGAGCCACATTCGTATCCAGGAAACCTCAGGATTTCTGTATTACATATAACGAGATAACTCCCAAAACCATGGAAAAGTACACCGTAATTATCAATACGACTCCTGTTGGAATGTTTCCGAATATAAATGAATGTCCTGATATTCCATACGATTTAGTAACTCCCAATCATTTGCTTTACGATTTGCTATACAATCCCGACGAAACTCTTTTTATGAAAAAAGGTAAAGAACAGGGAGCTGTAGTAAAAAACGGTTTAGAGATGTTACTACTTCAGGCCTTTGCTGCCTGGGAGATATGGCAAAAATAA
PROTEIN sequence
Length: 248
MQKYGLIGYPLSHSFSKAYFNQKFEIEKIDAEYVNFEIPNIKEFKNVIKENPDLCGLNVTLPYKTQIIPLLDDIDEDARLIGAVNVIKFSKGFFGKTKLKGYNSDIIGFKKSIEPLLNDTHRKALILGTGGASKAVFQGLKQMGVGATFVSRKPQDFCITYNEITPKTMEKYTVIINTTPVGMFPNINECPDIPYDLVTPNHLLYDLLYNPDETLFMKKGKEQGAVVKNGLEMLLLQAFAAWEIWQK*