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SCNpilot_bf_inoc_scaffold_1677_curated_3

Organism: scnpilot_dereplicated_Bacteroidales_1

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: comp(2023..2946)

Top 3 Functional Annotations

Value Algorithm Source
ribosome small subunit-dependent GTPase a; K06949 ribosome biogenesis GTPase [EC:3.6.1.-] similarity KEGG
DB: KEGG
  • Identity: 67.4
  • Coverage: 307.0
  • Bit_score: 430
  • Evalue 3.70e-118
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.4
  • Coverage: 307.0
  • Bit_score: 430
  • Evalue 1.60e-117
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7C7_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 67.4
  • Coverage: 307.0
  • Bit_score: 430
  • Evalue 1.20e-117

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Taxonomy

Paludibacter propionicigenes → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 924
ATGAAAGGTTTAGTAACAAAAAACACAGGTAGTTGGTATGAGGTAAAAACAGAAGGAGGTCAATCATACAACTGCAAAATCAAAGGTAATTTACGATTAAAAGACATAAAAAGCACCAATCCGATTGCTGTAGGAGATTTTGTTGAATTTGCCCTTTCAGATGATGAGACAGGAATAATCAGTGATATTCATGATCGAAAAAACTATATTATCAGGCGATCATCCAATTTATCAAAGCAATCGCACATATTGGCAGCCAACTTAGATTTGGTTATTTTAGTAGTTACCATCAATTATCCAGAAACATCCACAATCTTTATCGACAGATTTATAGCGTCAGCAGAAGCTTACAATATACCGGCATGTATAGTTATAAACAAAACCGACTTATATAATGATGATGAAATGCAATATGCCGAAGCATTGAAATCACTATATGAAATTATTGGTTATCCGGTATTTATGATATCTGCAATACAAAAAGAAAGCTCCATTGAACTGAGCAAATACTTAAAAGATAAAACCACTTTAATATCAGGTAATTCAGGAGTAGGAAAATCCACATTAATCAACTCATTACTACCGGAATCCATCATCAAAACTAATGAAATTTCATTCTTTCATAATAGAGGAACACATACCACAACTTTCTCGCAGATGTATGAATTAGAGAATGGAGGATTAATAATAGACACACCCGGAATAAAAGGATTCGGTACTATAGATATGGAGCAAGACGAGATAAGTCACTATTTCAAAGAGATATTTAAAACATCAAAAAACTGTAGATTTACGAACTGCACACATATACACGAACCGGATTGTGCAGTATTAAAAGCAGTAGAAAACCATCAAATCAGTCAGTCGCGCTACAACAGCTATTTGAGTATTTTATCAGATTTTGGAGACGGTAAATACAGATAA
PROTEIN sequence
Length: 308
MKGLVTKNTGSWYEVKTEGGQSYNCKIKGNLRLKDIKSTNPIAVGDFVEFALSDDETGIISDIHDRKNYIIRRSSNLSKQSHILAANLDLVILVVTINYPETSTIFIDRFIASAEAYNIPACIVINKTDLYNDDEMQYAEALKSLYEIIGYPVFMISAIQKESSIELSKYLKDKTTLISGNSGVGKSTLINSLLPESIIKTNEISFFHNRGTHTTTFSQMYELENGGLIIDTPGIKGFGTIDMEQDEISHYFKEIFKTSKNCRFTNCTHIHEPDCAVLKAVENHQISQSRYNSYLSILSDFGDGKYR*