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SCNpilot_bf_inoc_scaffold_490_curated_12

Organism: scnpilot_dereplicated_Bacteroidales_1

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: comp(10577..11281)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T575_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 86.3
  • Coverage: 234.0
  • Bit_score: 410
  • Evalue 9.60e-112
two component transcriptional regulator, winged helix family similarity KEGG
DB: KEGG
  • Identity: 86.3
  • Coverage: 234.0
  • Bit_score: 410
  • Evalue 3.00e-112
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADQ79869.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 234.0
  • Bit_score: 410
  • Evalue 1.30e-111

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Taxonomy

Paludibacter propionicigenes → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 705
ATGAATGATGAAAAAGTAAAAATTTTATTATGCGAGGACGATGAGAACCTCGGCATGTTACTAAGAGAATACCTCCAATCGAGAGGCTATGACGCAGACCTGCAACCTGATGGCGAAGCCGGATACAGGGCTTTTACTAAAAACAAATACGATCTTTGTGTTTTAGATGTTATGATGCCTAAAAAAGATGGCTTTACATTAGCATCGGATATTCGTAATATCAACTCTGAAGTTCCAATCATCTTTTTAACTGCTAAATCGATGAAAGAAGATATTCTTCAAGGATTTAAACTTGGAGCAGATGATTATCTTTCAAAACCATTTAGCATGGAGGAATTACTCTCGAGAATAGAATCTATTTTAAGGAGAGTGAGAGGTAAAAAGATTAAAGATATAGTTATTTTTAATATTGGTGCTTTTGTGTTTGACGCTCAGAAGCAAGCTCTAATTTATGATGGCGAAACAAGAAAGCTGACTACAAAAGAATCTGAACTTCTAAGATTATTGGCTTCTAATGCAAATAGTATCCTTGAAAGGAATTATGCTCTGAAATCAATTTGGGAAGATGATAATTACTTTAATGCTCGTAGCATGGATGTGTATATTACAAAACTTCGCAAATTATTGAAAGATGATCCGAATGTAGCAATTATAAATATTCATGGTAAAGGTTACAAGTTAATCACACCACAAACAGGTGAATAA
PROTEIN sequence
Length: 235
MNDEKVKILLCEDDENLGMLLREYLQSRGYDADLQPDGEAGYRAFTKNKYDLCVLDVMMPKKDGFTLASDIRNINSEVPIIFLTAKSMKEDILQGFKLGADDYLSKPFSMEELLSRIESILRRVRGKKIKDIVIFNIGAFVFDAQKQALIYDGETRKLTTKESELLRLLASNANSILERNYALKSIWEDDNYFNARSMDVYITKLRKLLKDDPNVAIINIHGKGYKLITPQTGE*