ggKbase home page

SCNpilot_bf_inoc_scaffold_490_curated_26

Organism: scnpilot_dereplicated_Bacteroidales_1

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: 24684..24938

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S20 n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JF55_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 84.0
  • Bit_score: 141
  • Evalue 3.00e-31
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1517682 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium COT-184 OH4590.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.9
  • Coverage: 84.0
  • Bit_score: 146
  • Evalue 1.30e-32
SSU ribosomal protein s20p; K02968 small subunit ribosomal protein S20 similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 84.0
  • Bit_score: 139
  • Evalue 4.70e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Porphyromonadaceae bacterium COT-184 OH4590 → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 255
ATGGCAAATCATCAATCAGCAATTAAAAGAATTCGTCAAATTCAGAAACGTAGACTTCATAATCGTTATTATGCAAAGACTGCACGTAATGCAGTTCGCAAATTACGTACAACAACAGAGAAAGCTGTAGCTGTTGAATTATTACCAAAAGTAAGTTCAATGTTAGATAAACTTGCTAAACGTAATATTATTCACAAAAACAAAGCAGCAAACCTGAAGTCGAAATTGACACTTCACGTAAATAAGTTGGCATAA
PROTEIN sequence
Length: 85
MANHQSAIKRIRQIQKRRLHNRYYAKTARNAVRKLRTTTEKAVAVELLPKVSSMLDKLAKRNIIHKNKAANLKSKLTLHVNKLA*