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SCNpilot_bf_inoc_scaffold_1208_curated_1

Organism: scnpilot_dereplicated_Bacteroidales_1

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: comp(165..1562)

Top 3 Functional Annotations

Value Algorithm Source
Regulator protein pilR id=1789557 bin=GWE2_Bacteroidetes_42_24 species=Polaribacter irgensii genus=Polaribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 65.8
  • Coverage: 465.0
  • Bit_score: 598
  • Evalue 6.40e-168
Regulator protein pilR {ECO:0000313|EMBL:EAR13294.1}; TaxID=313594 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter irgensii 23-P.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.3
  • Coverage: 455.0
  • Bit_score: 577
  • Evalue 2.10e-161
Fis family two component sigma-54 specific transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 464.0
  • Bit_score: 513
  • Evalue 6.50e-143

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Taxonomy

Polaribacter irgensii → Polaribacter → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1398
ATGGACAGTAACAATCAAGATAAAATTAAAATTCTTATTTTAGACGATGAAAAACAATTCACAGAAGAGTTAAGCAGCTTTTTTGAAAATGAATATATTGCATATGAAGCTAATAATGTAGGTGATGGAAGGAGAATTTTAAATAATCAGGATATTGATATTCTTGTTTTAGATGTCAGACTGCCTGGCATAAATGGTCTCGAAATTCTTCAAGAGGTTAAGGAGAATAAGCCTCATATTGAGGTGATTGTGATTTCTGCACATGGTGATATGGAGACTGTTATCAAAGCTATGCGATTAGGTGCTTTCGATTATTTAAGAAAACCTTTTAGATTTTTAGAGCTGCAAATATCCATCGAACGTACCCAAAGATTTTTGAAACTTCAACGTCAACTAAGACAAATTGAAGAAAAAAACTCACTCATTTCCAAAACTCTTGAAGATAAAATCGAACGACAATTTATAGGTGTCAGTCCACAAATTAAATTAGTATTGGATCAAGCAAAAAAAGCGGCTGCATATCCTGATGCTAATGTGCTTATTACCGGAGAAAGCGGTACAGGCAAAGAAAATATTGCTCGAATAATACATTATGCAAGTCAACGCAAAGACAATTTATTTTGTGGAGTTAACAGTAGTGCTATTACGGAATCTCTTTTAGAAAGCGAGTTTTTCGGTCATAAAAAAGGTTCTTTCACAGGCGCTATTAATGATAAAATGGGTTATTTCGAAGCTTGTAATAACGGTACGCTTTTTCTTGATGAAATTGCTGATATGCCTTTTAATCTACAAGCTAAAATATTACGTGCCACAGAAGAAAAAGTTGTAACACGTGTAGGAGATACCATTCCAATTAAAACTAATTTCAGAATTATTTCAGCAACAAATCATGATATAGACAAACAGGTTGAAGAAAAAAAATTCAGGTTAGACTTGCTTCATCGTCTCAACACATTGCATATTCATATTCCTCCTTTAAGGGAACATAAAGAGGATATCAAGCCTTTATTAGACTATTATGTAAATCATTTTTCAATTCAATTTAACAAGCCTAATATAAAAATTTCAGAAGATGTCTATGAATATCTGTCAAACTATGATTTTCCCGGTAATGTAAGAGAATTAAAAAACATGGCTGAAAGAGCTGTGATTTTATGTAGTAATGATGTGTTGACTACAAATGACTTTCCATTAAAATCTACTGCAAAGCCTGAACAGATCCACATAGTTAGCAAAGTTGAACTAAAAACAAACGAAATTAAAAGTATTTTAGAAGCATTAAGAGCTTGCAACTACAATCAAACTGCTGCTGCCGGACTCTTGGGCATTTCACGAGATTCATTAATTCGAAAAATGAGAAAACACAATATATCCGTTTATAAAGGAAAAGAGGTGTAA
PROTEIN sequence
Length: 466
MDSNNQDKIKILILDDEKQFTEELSSFFENEYIAYEANNVGDGRRILNNQDIDILVLDVRLPGINGLEILQEVKENKPHIEVIVISAHGDMETVIKAMRLGAFDYLRKPFRFLELQISIERTQRFLKLQRQLRQIEEKNSLISKTLEDKIERQFIGVSPQIKLVLDQAKKAAAYPDANVLITGESGTGKENIARIIHYASQRKDNLFCGVNSSAITESLLESEFFGHKKGSFTGAINDKMGYFEACNNGTLFLDEIADMPFNLQAKILRATEEKVVTRVGDTIPIKTNFRIISATNHDIDKQVEEKKFRLDLLHRLNTLHIHIPPLREHKEDIKPLLDYYVNHFSIQFNKPNIKISEDVYEYLSNYDFPGNVRELKNMAERAVILCSNDVLTTNDFPLKSTAKPEQIHIVSKVELKTNEIKSILEALRACNYNQTAAAGLLGISRDSLIRKMRKHNISVYKGKEV*