ggKbase home page

SCNpilot_bf_inoc_scaffold_340_curated_34

Organism: scnpilot_dereplicated_Bacteroidales_1

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: comp(24418..25158)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S3 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7A1_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 85.8
  • Coverage: 253.0
  • Bit_score: 436
  • Evalue 1.30e-119
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 similarity KEGG
DB: KEGG
  • Identity: 85.8
  • Coverage: 253.0
  • Bit_score: 436
  • Evalue 4.10e-120
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 253.0
  • Bit_score: 436
  • Evalue 1.80e-119

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Paludibacter propionicigenes → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 741
ATGGGACAAAAAACTAATCCAATAAGTAATCGCTTAGGAATCATACGTGGATGGGATTCTAACTGGTATGGTGGTCAGAATTATGGCGACACAATTCTTGAAGACAGCAATATCAGAAAGTATTTGAATACACGTTTAGCAAAAGCCAGTGTGTCGCGTATTGTTATTGAACGTACGTTAAAATTGGTAACGATAACTGTTTGTACTGCAAGACCGGGTATAATTATCGGTAAGGGAGGACAAGAAGTTGATAAATTGAAAGAAGAATTGAAGAAAATCACCGATAAGGAGATTCAAATCAATATATTTGAAATAAAACGTCCGGAATTAGATGCTGTTATAGTAGCAAATAATGTTGCACGTCAGATTGAAGGCAAAATTGCTTATCGTCGTGCCGTTAAAATGGCTATTGCTTCTACGATGCGTATCGGAGCTGAAGGAATTAAAATTCAGGTTTCGGGACGTTTAAACGGTGCAGAAATGGCACGTTCAGAGATGTATAAAGAAGGTAGAACACCTTTGCATACATTTAGAGCAGACATAGATTATGCACATGCTGAAGCCTTGACAAAGGTTGGGATTGTAGGTGTAAAAGTATGGATTTGCCGCGGCGAAATCTATGGAAAGAAAGACCTGGCTCCTTCCTTTGGAACAACAAAAGACAATACTCGTGGTGGCGATCGTTTCGGTGGAGATCATGGCGAACGTGGCGGTAAAGGATTCAGAAAGAGAAAAAAGTAA
PROTEIN sequence
Length: 247
MGQKTNPISNRLGIIRGWDSNWYGGQNYGDTILEDSNIRKYLNTRLAKASVSRIVIERTLKLVTITVCTARPGIIIGKGGQEVDKLKEELKKITDKEIQINIFEIKRPELDAVIVANNVARQIEGKIAYRRAVKMAIASTMRIGAEGIKIQVSGRLNGAEMARSEMYKEGRTPLHTFRADIDYAHAEALTKVGIVGVKVWICRGEIYGKKDLAPSFGTTKDNTRGGDRFGGDHGERGGKGFRKRKK*