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SCNpilot_bf_inoc_scaffold_29_curated

Search features with annotation key words

Displaying items 211-240 of 249 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_29_curated_211
RIFOXYB2_FULL_WOR_2_38_16_curated, WOR-2, Bacteria

Not on your lists

comp(232398..232967)
DNA (570bp) protein (190aa)
id=2624357 bin=GWF2_OP3_38_59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
Tax=RIFOXYB2_FULL_WOR_2_38_16_curated
SCNpilot_bf_inoc_scaffold_29_curated_212
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(233114..234247)
DNA (1134bp) protein (378aa)
udp-N-acetylglucosamine 2-epimerase (EC:5.1.3.14); K01791 UDP-N-acetylglucosamine 2-epimerase [EC:5.1.3.14]
UDP-N-acetylglucosamine 2-epimerase id=4490157 bin=GWC2_Bacteroidetes_46_850 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_29_curated_213
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(234509..234880)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Cecembia lonarensis LW9 RepID=K1LHD6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KFF01247.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_29_curated_214
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(234946..236106)
DNA (1161bp) protein (387aa)
NAD-dependent epimerase/dehydratase id=4490156 bin=GWC2_Bacteroidetes_46_850 species=Bacillus alcalophilus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
NAD-dependent epimerase/dehydratase
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_29_curated_215
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(236112..237125)
DNA (1014bp) protein (338aa)
UDP-glucose 4-epimerase id=4490155 bin=GWC2_Bacteroidetes_46_850 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
dehydratase rbh
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_29_curated_216
Chryseobacterium luteum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(237125..238291)
DNA (1167bp) protein (389aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000379C235
Glycosyl transferase family 1 {ECO:0000313|EMBL:KFF02593.1}; TaxID=421531 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium luteum.;"
group 1 glycosyl transferase
SCNpilot_bf_inoc_scaffold_29_curated_217
Bacteroides sp. 2_1_56FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(238329..239495)
DNA (1167bp) protein (389aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_56FAA RepID=F7LLW8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGM97779.1}; TaxID=665938 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_56FAA.;"
group 1 glycosyl transferase
SCNpilot_bf_inoc_scaffold_29_curated_218
Dokdonia sp. 4H-3-7-5, Dokdonia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(239504..240049)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Krokinobacter sp. (strain 4H-3-7-5) RepID=F4AWT8_KROS4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE20746.1}; TaxID=983548 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Dokdonia.;" source="Dokdonia sp. (strain 4H-3-7-5) (Krokinobacter sp. (strain 4H-3-7-5)).;"
SCNpilot_bf_inoc_scaffold_29_curated_219
unknown

Not on your lists

comp(240046..240363)
DNA (318bp) protein (106aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_29_curated_220
Bacteroides sp. 2_1_56FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(240533..241732)
DNA (1200bp) protein (400aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_56FAA RepID=F7LLW3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGM97774.1}; TaxID=665938 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_56FAA.;"
group 1 glycosyl transferase
SCNpilot_bf_inoc_scaffold_29_curated_221
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(241970..243175)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Polaribacter sp. MED152 RepID=A2U046_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KEY18823.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_29_curated_222
Bacteroides sp. 2_1_56FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(243230..244573)
DNA (1344bp) protein (448aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_56FAA RepID=F7LPA9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN08404.1}; TaxID=665938 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_56FAA.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_29_curated_223
Bizionia argentinensis, Bizionia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(244937..246346)
DNA (1410bp) protein (470aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036D6F61
Polysaccharide biosynthesis family protein {ECO:0000313|EMBL:EGV43049.1}; TaxID=1046627 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bizionia.;" source="Bizionia argentinensis JUB59.;"
polysaccharide biosynthesis protein
SCNpilot_bf_inoc_scaffold_29_curated_224
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

246428..246760
DNA (333bp) protein (111aa)
Transposase IS3 family id=4136618 bin=GWC2_Bacteroidetes_46_850 species=Flavobacterium indicum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Transposase IS3 family
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_29_curated_225
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

246892..247650
DNA (759bp) protein (253aa)
Transposase IS3 family protein id=1809807 bin=GWD2_Bacteroidales_45_23 species=Myroides injenensis genus=Myroides taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Transposase IS3 family
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_29_curated_226
unknown

Not on your lists

comp(247660..247791)
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_29_curated_227
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(248229..248966)
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=Bacteroides eggerthii DSM 20697 RepID=B7AGN6_9BACE
Short chain dehydrogenase family protein {ECO:0000313|EMBL:EYE44123.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
short chain dehydrogenase
SCNpilot_bf_inoc_scaffold_29_curated_228
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(248953..249747)
DNA (795bp) protein (265aa)
Hydrolase, carbon-nitrogen family n=1 Tax=Capnocytophaga sp. oral taxon 324 str. F0483 RepID=L1PBW7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:BAR48540.1}; TaxID=1307832 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia 3313.;"
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; K08590 carbon-nitrogen hydrolase family protein
SCNpilot_bf_inoc_scaffold_29_curated_229
Capnocytophaga sp. oral taxon 324, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(249749..251041)
DNA (1293bp) protein (431aa)
glutamate-1-semialdehyde 2,1-aminomutase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
Aminotransferase, class III n=1 Tax=Capnocytophaga sp. oral taxon 324 str. F0483 RepID=L1PCE7_9FLAO
Aminotransferase, class III {ECO:0000313|EMBL:EKY13145.1}; TaxID=1127691 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sp. oral taxon 324 str. F0483.;"
SCNpilot_bf_inoc_scaffold_29_curated_230
Thermoanaerobacter italicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(251054..251788)
DNA (735bp) protein (245aa)
N-acylneuraminate cytidylyltransferase (EC:2.7.7.43); K00983 N-acylneuraminate cytidylyltransferase [EC:2.7.7.43]
N-acylneuraminate cytidylyltransferase {ECO:0000313|EMBL:ADD01791.1}; EC=2.7.7.43 {ECO:0000313|EMBL:ADD01791.1};; TaxID=580331 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter italicus (strain DSM 9252 / Ab9).;"
N-acylneuraminate cytidylyltransferase n=1 Tax=Thermoanaerobacter italicus (strain DSM 9252 / Ab9) RepID=D3T759_THEIA
SCNpilot_bf_inoc_scaffold_29_curated_231
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(251802..252839)
DNA (1038bp) protein (346aa)
Nucleoside-diphosphate-sugar pyrophosphorylase family protein id=4520647 bin=GWF2_Bacteroidetes_40_14 species=Chryseobacterium sp. CF314 genus=Chryseobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
Nucleotidyl transferase
Tax=GWF2_Bacteroidetes_40_14_curated
SCNpilot_bf_inoc_scaffold_29_curated_232
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(252836..253948)
DNA (1113bp) protein (371aa)
UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing id=4520648 bin=GWF2_Bacteroidetes_40_14 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
UDP-N-acetyl-D-glucosamine 2-epimerase
Tax=GWF2_Bacteroidetes_40_14_curated
SCNpilot_bf_inoc_scaffold_29_curated_233
Bacteroides eggerthii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(253945..254955)
DNA (1011bp) protein (337aa)
neuB; N-acetylneuraminate synthase; K01654 N-acetylneuraminate synthase [EC:2.5.1.56]
Putative uncharacterized protein n=1 Tax=Bacteroides eggerthii DSM 20697 RepID=B7AGN1_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EEC54160.1}; TaxID=483216 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides eggerthii DSM 20697.;"
SCNpilot_bf_inoc_scaffold_29_curated_234
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(254965..255606)
DNA (642bp) protein (214aa)
Putative uncharacterized protein id=4490137 bin=GWC2_Bacteroidetes_46_850 species=Bacteroides eggerthii genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
transferase hexapeptide repeat protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_29_curated_235
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(255603..256745)
DNA (1143bp) protein (381aa)
Uncharacterized protein id=4490044 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
aminotransferase rbh
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_29_curated_236
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(256738..257715)
DNA (978bp) protein (326aa)
NAD dependent epimerase/dehydratase family protein n=1 Tax=Odoribacter sp. CAG:788 RepID=R5P9F0_9PORP
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:CCZ10919.1}; TaxID=1262909 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter sp. CAG:788.;"
NAD dependent epimerase/dehydratase family protein
SCNpilot_bf_inoc_scaffold_29_curated_237
Desulfotignum phosphitoxidans, Desulfotignum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(257730..258998)
DNA (1269bp) protein (423aa)
UDP-glucose-6 dehydrogenase; K02474 UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.-]
UDP-glucose dehydrogenase n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0G032_9DELT
UDP-glucose dehydrogenase {ECO:0000313|EMBL:EMS78794.1}; TaxID=1286635 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfotignum.;" source="Desulfotignum phosphitoxidans DSM 13687.;"
SCNpilot_bf_inoc_scaffold_29_curated_238
Mucinivorans hirudinis, Mucinivorans, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(259018..260010)
DNA (993bp) protein (331aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:CDN32802.1}; EC=5.1.3.2 {ECO:0000313|EMBL:CDN32802.1};; TaxID=1433126 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Mucinivorans.;" source="Mucinivorans hirudinis.;"
UDP-glucose 4-epimerase (EC:5.1.3.2); K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
epimerase n=1 Tax=Empedobacter brevis RepID=UPI0003820911
SCNpilot_bf_inoc_scaffold_29_curated_239
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(260088..260627)
DNA (540bp) protein (180aa)
Transcriptional regulator, PaaX family n=1 Tax=uncultured bacterium RepID=K1Y4Y7_9BACT
transcriptional regulator, paax family
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_bf_inoc_scaffold_29_curated_240
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(260666..261814)
DNA (1149bp) protein (383aa)
Lipopolysaccharide biosynthesis protein n=1 Tax=uncultured bacterium RepID=K1YIK7_9BACT
lipopolysaccharide biosynthesis protein
Tax=BJP_IG2069_Bacteroidetes_43_11
Displaying items 211-240 of 249 in total

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