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SCNpilot_bf_inoc_scaffold_569_curated

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_569_curated_1
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(129..491)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036824A7
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_569_curated_2
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(552..830)
DNA (279bp) protein (93aa)
Toxin RelK {ECO:0000313|EMBL:KHJ39673.1}; EC=3.1.-.- {ECO:0000313|EMBL:KHJ39673.1};; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
Txe/YoeB family addiction module toxin n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Z9U4_9PORP
Txe/YoeB family addiction module toxin
SCNpilot_bf_inoc_scaffold_569_curated_3
Flavobacterium psychrophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(832..1086)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Flavobacterium psychrophilum RepID=Q83XW2_FLAPS
Uncharacterized protein {ECO:0000313|EMBL:AAP32307.1}; TaxID=96345 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_569_curated_4
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1185..2171)
DNA (987bp) protein (329aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035EDBF6
TIM-barrel enzyme
SCNpilot_bf_inoc_scaffold_569_curated_5
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2176..2538)
DNA (363bp) protein (121aa)
arsenate reductase; K00537 arsenate reductase [EC:1.20.4.1]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037C68A2
Uncharacterized protein {ECO:0000313|EMBL:CEA17035.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
SCNpilot_bf_inoc_scaffold_569_curated_6
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(2769..4079)
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036F8FE8
ABC transporter permease; K01992 ABC-2 type transport system permease protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_569_curated_7
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(4091..4990)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003785554
ABC transporter ATP-binding protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_569_curated_8
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(5012..7066)
DNA (2055bp) protein (685aa)
DNA primase (EC:2.7.7.-); K02316 DNA primase [EC:2.7.7.-]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003668934
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_569_curated_9
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7177..8196
DNA (1020bp) protein (340aa)
Branched-chain-amino-acid aminotransferase {ECO:0000313|EMBL:CEA17024.1}; EC=2.6.1.42 {ECO:0000313|EMBL:CEA17024.1};; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
branched-chain amino acid aminotransferase (EC:2.6.1.42); K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] rbh
Branched-chain amino acid aminotransferase id=4483785 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
SCNpilot_bf_inoc_scaffold_569_curated_10
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(8237..8710)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003778FF4
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_569_curated_11
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(9089..9445)
DNA (357bp) protein (119aa)
phosphonate-transporting ATPase (EC:3.6.3.28)
Putative uncharacterized protein id=3913517 bin=GWF2_Bacteroidetes_42_66 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_bf_inoc_scaffold_569_curated_12
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(9485..9937)
DNA (453bp) protein (151aa)
hypothetical protein MsalJ2_19156 id=1871507 bin=GWD2_Bacteroidetes_40_43 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein; K02004 putative ABC transport system permease protein
Tax=GWE2_Bacteroidetes_40_63_curated
SCNpilot_bf_inoc_scaffold_569_curated_13
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9953..10651)
DNA (699bp) protein (233aa)
Phosphonate-transporting ATPase (EC:3.6.3.28); K02003 putative ABC transport system ATP-binding protein
Phosphonate ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHW59494.1}; TaxID=1168034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium orientale.;"
Phosphonate-transporting ATPase id=1846954 bin=GWA2_Bacteroidetes_42_15 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
SCNpilot_bf_inoc_scaffold_569_curated_14
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10839..13190)
DNA (2352bp) protein (784aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EAJ6_RUNSL
Uncharacterized protein {ECO:0000313|EMBL:AHW61753.1}; TaxID=1168034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium orientale.;"
hypothetical protein; K02004 putative ABC transport system permease protein
SCNpilot_bf_inoc_scaffold_569_curated_15
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13254..14504)
DNA (1251bp) protein (417aa)
ABC transporter permease n=1 Tax=Anaerophaga thermohalophila RepID=UPI00036A504D
ABC transporter permease {ECO:0000313|EMBL:KJF44108.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein
SCNpilot_bf_inoc_scaffold_569_curated_16
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(14551..15900)
DNA (1350bp) protein (450aa)
Putative outer membrane transport/efflux protein id=1794459 bin=GWE2_Bacteroidetes_42_39 species=unknown genus=Maribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
outer membrane efflux protein
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_bf_inoc_scaffold_569_curated_17
unknown

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comp(15970..16155)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_569_curated_18
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16189..16413
DNA (225bp) protein (75aa)
Uncharacterized protein id=3052567 bin=GWF2_Bacteroidetes_41_31 species=Chryseobacterium sp. CF314 genus=Chryseobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
DNA-damage-inducible protein D; K14623 DNA-damage-inducible protein D
Tax=GWA2_Bacteroidetes_31_9_curated
SCNpilot_bf_inoc_scaffold_569_curated_19
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16538..17899
DNA (1362bp) protein (454aa)
two component sigma-54 specific Fis family transcriptional regulator id=2815175 bin=GWF2_Bacteroidetes_49_14 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
ATPase AAA {ECO:0000313|EMBL:KJF44110.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
two-component system response regulator
SCNpilot_bf_inoc_scaffold_569_curated_20
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17945..19276
DNA (1332bp) protein (444aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
multi-sensor signal transduction histidine kinase id=1846938 bin=GWA2_Bacteroidetes_42_15 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
multi-sensor signal transduction histidine kinase
SCNpilot_bf_inoc_scaffold_569_curated_21
Bacteroides eggerthii CAG:109, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19483..20619)
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000369913A
Uncharacterized protein {ECO:0000313|EMBL:CCY57217.1}; TaxID=1263043 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides eggerthii CAG:109.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_569_curated_22
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20642..22144)
DNA (1503bp) protein (501aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003746DBF
Uncharacterized protein {ECO:0000313|EMBL:EFS33089.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
RagB/SusD domain-containing protein
SCNpilot_bf_inoc_scaffold_569_curated_23
Bacteroides eggerthii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22156..25248)
DNA (3093bp) protein (1031aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037D9685
TonB-dependent Receptor Plug domain-containing protein {ECO:0000313|EMBL:EFV31610.1}; TaxID=665953 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides eggerthii 1_2_48FAA.;"
TonB-dependent receptor plug
SCNpilot_bf_inoc_scaffold_569_curated_24
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25276..28023)
DNA (2748bp) protein (916aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003668F53
Uncharacterized protein {ECO:0000313|EMBL:KFC59035.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
alpha-1,2-mannosidase
SCNpilot_bf_inoc_scaffold_569_curated_25
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28037..28894)
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037B772A
Uncharacterized protein {ECO:0000313|EMBL:EFS33091.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
SCNpilot_bf_inoc_scaffold_569_curated_26
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29001..30092)
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003665751
Uncharacterized protein {ECO:0000313|EMBL:CEA15314.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
Transcriptional regulator/sugar kinase
SCNpilot_bf_inoc_scaffold_569_curated_27
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30082..31245)
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037146E7
Glucose/galactose transporter {ECO:0000313|EMBL:CEA15313.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
glucose/galactose transporter
SCNpilot_bf_inoc_scaffold_569_curated_28
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31257..33008)
DNA (1752bp) protein (584aa)
Phosphomannose isomerase (EC:5.3.1.8)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036AEDCC
Uncharacterized protein {ECO:0000313|EMBL:CEA15312.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
SCNpilot_bf_inoc_scaffold_569_curated_29
unknown

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33312..33560
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003791F98
Displaying 29 items

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