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SCNpilot_bf_inoc_scaffold_285_curated

Search features with annotation key words

Displaying items 31-60 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_285_curated_31
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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38457..39839
DNA (1383bp) protein (461aa)
leuC; 3-isopropylmalate dehydratase large subunit; K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
3-isopropylmalate dehydratase large subunit id=2119910 bin=GWD2_Bacteroidales_45_23 species=Tannerella forsythia genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_285_curated_32
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39849..40454
DNA (606bp) protein (202aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
leuD; 3-isopropylmalate dehydratase small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
3-isopropylmalate dehydratase small subunit n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003720E91
SCNpilot_bf_inoc_scaffold_285_curated_33
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40485..42041
DNA (1557bp) protein (519aa)
HMGL-like protein; K09011 D-citramalate synthase [EC:2.3.1.182]
HMGL-like protein n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UNY1_TANFA
HMGL-like protein {ECO:0000313|EMBL:BAR51566.1}; TaxID=1307833 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia KS16.;"
SCNpilot_bf_inoc_scaffold_285_curated_34
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42055..43128
DNA (1074bp) protein (358aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
leuB; 3-isopropylmalate dehydrogenase; K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
3-isopropylmalate dehydrogenase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036C1656
SCNpilot_bf_inoc_scaffold_285_curated_35
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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43309..45150
DNA (1842bp) protein (614aa)
dihydroxyacid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9]
Dihydroxy-acid dehydratase id=2119902 bin=GWD2_Bacteroidales_45_23 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_285_curated_36
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

45205..46962
DNA (1758bp) protein (586aa)
Acetolactate synthase large subunit {ECO:0000313|EMBL:CEA15496.1}; EC=2.2.1.6 {ECO:0000313|EMBL:CEA15496.1};; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
acetolactate synthase large subunit; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035FF639
SCNpilot_bf_inoc_scaffold_285_curated_37
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

46975..47544
DNA (570bp) protein (190aa)
acetohydroxyacid synthase small subunit; K01653 acetolactate synthase I/III small subunit [EC:2.2.1.6]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036BF392
Uncharacterized protein {ECO:0000313|EMBL:CEA15497.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
SCNpilot_bf_inoc_scaffold_285_curated_38
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

47811..48848
DNA (1038bp) protein (346aa)
Ketol-acid reductoisomerase {ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|SAAS:SAAS00051427};; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
ketol-acid reductoisomerase; K00053 ketol-acid reductoisomerase [EC:1.1.1.86]
ketol-acid reductoisomerase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003623AC9
SCNpilot_bf_inoc_scaffold_285_curated_39
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(48881..49501)
DNA (621bp) protein (207aa)
hypothetical protein; K02619 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000367795D
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_285_curated_40
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(49512..50447)
DNA (936bp) protein (312aa)
para-aminobenzoate synthase component I; K01665 para-aminobenzoate synthetase component I [EC:2.6.1.85]
Para-aminobenzoate synthase component I id=3592480 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_285_curated_41
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

50538..51485
DNA (948bp) protein (316aa)
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9); K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00038240DC
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_285_curated_42
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(51658..53163)
DNA (1506bp) protein (502aa)
Uncharacterized protein {ECO:0000313|EMBL:CEA15078.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
Putative uncharacterized protein id=1746922 bin=GWD2_Bacteroidales_45_23 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein
SCNpilot_bf_inoc_scaffold_285_curated_43
Bacteroides faecis CAG:32, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

53315..54205
DNA (891bp) protein (297aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1263044 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides faecis CAG:32.;"
glucose-1-phosphate thymidylyltransferase; K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] rbh
glucose-1-phosphate thymidylyltransferase n=1 Tax=Porphyromonas macacae RepID=UPI00037495F3
SCNpilot_bf_inoc_scaffold_285_curated_44
Capnocytophaga canimorsus, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

54202..54747
DNA (546bp) protein (182aa)
dTDP-4-deoxyrhamnose-3,5-epimerase {ECO:0000313|EMBL:CEN43452.1}; EC=5.1.3.13 {ECO:0000313|EMBL:CEN43452.1};; TaxID=28188 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga canimorsus.;"
dTDP-L-rhamnose synthetase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
dTDP-L-rhamnose synthetase n=2 Tax=Capnocytophaga canimorsus RepID=F9YVV5_CAPCC
SCNpilot_bf_inoc_scaffold_285_curated_45
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

54747..55805
DNA (1059bp) protein (353aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46); K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
dTDP-glucose 4,6-dehydratase id=1747360 bin=GWD2_Bacteroidales_45_23 species=Alistipes putredinis genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_285_curated_46
unknown

Not on your lists

55880..56053
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_285_curated_47
RBG_13_Bacteroidetes_43_22_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

56406..56699
DNA (294bp) protein (98aa)
Uncharacterized protein id=4823681 bin=GWA2_Bacteroidetes_A19_40_15 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Bacteroidetes_A19_40_15 organism_group=Bacteroidetes
Tax=RBG_13_Bacteroidetes_43_22_curated
SCNpilot_bf_inoc_scaffold_285_curated_48
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

56674..57288
DNA (615bp) protein (205aa)
Uncharacterized protein id=4823682 bin=GWA2_Bacteroidetes_A19_40_15 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Bacteroidetes_A19_40_15 organism_group=Bacteroidetes
hypothetical protein
Tax=GWA2_Bacteroidetes_31_9_curated
SCNpilot_bf_inoc_scaffold_285_curated_49
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

57418..58545
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D13 RepID=C7XC78_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU50428.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Predicted ATPase (AAA+ superfamily)
SCNpilot_bf_inoc_scaffold_285_curated_50

Not on your lists

58638..58967
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000360B6D0
Uncharacterized protein {ECO:0000313|EMBL:EKC63837.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_285_curated_51
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

58987..59658
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000379721E
Uncharacterized protein {ECO:0000313|EMBL:EIY85757.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_285_curated_52
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

59670..60194
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036E4F46
Transcriptional regulator UpxY-like protein {ECO:0000313|EMBL:CEA16016.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
transcriptional regulator
SCNpilot_bf_inoc_scaffold_285_curated_53
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

60264..62645
DNA (2382bp) protein (794aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035D7616
Capsule polysaccharide export protein {ECO:0000313|EMBL:CEA15256.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
polysaccharide export protein
SCNpilot_bf_inoc_scaffold_285_curated_54
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

62655..63794
DNA (1140bp) protein (380aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036CDD49
Uncharacterized protein {ECO:0000313|EMBL:CEA15257.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
lipopolysaccharide biosynthesis protein
SCNpilot_bf_inoc_scaffold_285_curated_55
unknown

Not on your lists

comp(63791..63943)
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_285_curated_56
Porphyromonas endodontalis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

64073..65662
DNA (1590bp) protein (530aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003628412
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EEN82657.1}; TaxID=553175 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas endodontalis ATCC 35406.;"
polysaccharide biosynthesis protein
SCNpilot_bf_inoc_scaffold_285_curated_57
Bacteroides nordii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

65662..66720
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003768552
Uncharacterized protein {ECO:0000313|EMBL:EIY46538.1}; TaxID=997884 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides nordii CL02T12C05.;"
NAD-dependent epimerase/dehydratase
SCNpilot_bf_inoc_scaffold_285_curated_58
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

66733..68472
DNA (1740bp) protein (580aa)
thiamine pyrophosphate binding domain-containing protein; K02551 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
thiamine pyrophosphate-binding protein n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237CDFC
Uncharacterized protein {ECO:0000313|EMBL:EIY97106.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
SCNpilot_bf_inoc_scaffold_285_curated_59
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

68548..69780
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis dnLKV3 RepID=R9I279_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS10357.1}; TaxID=1235788 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis dnLKV3.;"
polysaccharide pyruvyl transferase
SCNpilot_bf_inoc_scaffold_285_curated_60
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

69767..70687
DNA (921bp) protein (307aa)
Glycosyltransferase group 2 family protein n=1 Tax=Alistipes sp. CAG:268 RepID=R6VL22_9BACT
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CDC97655.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
glycosyltransferase, group 2 family protein
Displaying items 31-60 of 74 in total

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