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SCNpilot_bf_inoc_scaffold_131_curated

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Displaying items 181-203 of 203 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_131_curated_181
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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235933..236373
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J2J8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK00099.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
helix-turn-helix domain-containing protein
SCNpilot_bf_inoc_scaffold_131_curated_182
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(236428..236709)
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X3U0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05229.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
RRM domain-containing RNA-binding protein
SCNpilot_bf_inoc_scaffold_131_curated_183
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(236758..237183)
DNA (426bp) protein (142aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5ZBK2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB57716.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
cold shock protein
SCNpilot_bf_inoc_scaffold_131_curated_184
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(237624..238508)
DNA (885bp) protein (295aa)
Filamentation induced by cAMP protein Fic id=4525229 bin=GWF2_Bacteroidetes_40_14 species=Treponema saccharophilum genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
filamentation induced by cAMP protein fic; K04095 cell filamentation protein
Tax=GWF2_Bacteroidetes_40_14_curated
SCNpilot_bf_inoc_scaffold_131_curated_185

Not on your lists

comp(238522..238941)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Tetrasphaera phage TJE1 RepID=G4W998_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:KKM44176.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_bf_inoc_scaffold_131_curated_186
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(238955..239266)
DNA (312bp) protein (104aa)
Putative DNA repair ATPase id=2554586 bin=GWC2_Bacteroidetes_46_850 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
prophage antirepressor
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_131_curated_187
Capnocytophaga sputigena, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(239617..239781)
DNA (165bp) protein (55aa)
Divergent AAA domain protein n=1 Tax=Capnocytophaga sp. oral taxon 332 str. F0381 RepID=L1P9S7_9FLAO
Divergent AAA domain protein {ECO:0000313|EMBL:EEB65216.1}; TaxID=553177 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sputigena ATCC 33612.;"
SCNpilot_bf_inoc_scaffold_131_curated_188
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(239753..240730)
DNA (978bp) protein (326aa)
hypothetical protein MsalJ2_13078 id=4525155 bin=GWF2_Bacteroidetes_40_14 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_40_14_curated
SCNpilot_bf_inoc_scaffold_131_curated_189
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(240727..241446)
DNA (720bp) protein (240aa)
Putative uncharacterized protein id=4525228 bin=GWF2_Bacteroidetes_40_14 species=unknown genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_40_14_curated
SCNpilot_bf_inoc_scaffold_131_curated_190
unknown

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comp(241646..241924)
DNA (279bp) protein (93aa)
Filamentation induced by cAMP protein Fic id=1909738 bin=GWE2_Bacteroidetes_40_15 species=Pelodictyon phaeoclathratiforme genus=Pelodictyon taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
SCNpilot_bf_inoc_scaffold_131_curated_191
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(242717..244024)
DNA (1308bp) protein (436aa)
putative transcriptional regulator; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12]
transcriptional regulator n=1 Tax=Myroides injenensis RepID=UPI00028879A8
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
SCNpilot_bf_inoc_scaffold_131_curated_192
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

comp(244027..244341)
DNA (315bp) protein (105aa)
TatD-related deoxyribonuclease; K03424 TatD DNase family protein [EC:3.1.21.-]
TatD-related deoxyribonuclease n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SEA5_PEDSD
Tax=BJP_IG2103_Bacteroidetes_40_10
SCNpilot_bf_inoc_scaffold_131_curated_193
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(244331..244666)
DNA (336bp) protein (112aa)
Phage integrase n=1 Tax=Flavobacterium sp. F52 RepID=J0S4X3_9FLAO
Recombinase {ECO:0000313|EMBL:KFF15668.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
phage integrase
SCNpilot_bf_inoc_scaffold_131_curated_194
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(244678..245217)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64X00_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD47976.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
SCNpilot_bf_inoc_scaffold_131_curated_195
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

comp(245957..248812)
DNA (2856bp) protein (952aa)
Predicted Zn-dependent peptidases id=1826703 bin=GWE2_Bacteroidetes_40_15 species=Alistipes shahii genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
Tax=BJP_08E140C01_Bacteroidetes_41_49
SCNpilot_bf_inoc_scaffold_131_curated_196
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(248846..249562)
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Riemerella columbina RepID=UPI000376E7A5
Uncharacterized protein {ECO:0000313|EMBL:EMR01129.1}; TaxID=1279009 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribacter andamanensis AMV16.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_131_curated_197
Bacteroidales bacterium CF, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(249583..251682)
DNA (2100bp) protein (700aa)
Peptidase S n=1 Tax=Bacteroidales bacterium CF RepID=U5Q7J0_9BACT
hypothetical protein
Peptidase S {ECO:0000313|EMBL:AGY54451.1}; TaxID=1400053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales.;" source="Bacteroidales bacterium CF.;"
SCNpilot_bf_inoc_scaffold_131_curated_198
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(251734..253680)
DNA (1947bp) protein (649aa)
4Fe-4S ferredoxin iron-sulfur binding protein n=1 Tax=uncultured bacterium RepID=K1XMY1_9BACT
hypothetical protein
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_bf_inoc_scaffold_131_curated_199
BJP_IG2102_Bacteroidetes_40_12, Bacteroidetes, Bacteria

Not on your lists

comp(253736..255319)
DNA (1584bp) protein (528aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Y5T8_9BACT
hypothetical protein
Tax=BJP_IG2102_Bacteroidetes_40_12
SCNpilot_bf_inoc_scaffold_131_curated_200
BJP_IG2102_Bacteroidetes_40_12, Bacteroidetes, Bacteria

Not on your lists

comp(255362..256591)
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Bacteroidales bacterium CF RepID=U5Q8Q9_9BACT
hypothetical protein
Tax=BJP_IG2102_Bacteroidetes_40_12
SCNpilot_bf_inoc_scaffold_131_curated_201

Not on your lists

comp(256664..259843)
DNA (3180bp) protein (1060aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z3V3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD32514.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_131_curated_202
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(259967..261184)
DNA (1218bp) protein (406aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000376AFDD
FecR protein {ECO:0000313|EMBL:CEA14965.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
sigma factor regulatory protein, FecR/PupR family
SCNpilot_bf_inoc_scaffold_131_curated_203
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(261343..261939)
DNA (597bp) protein (199aa)
Sigma-70 region 2 n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UQ00_TANFA
Sigma-70 region 2
Sigma-70 region 2 {ECO:0000313|EMBL:AEW21168.1}; TaxID=203275 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338); (Bacteroides forsythus).;"
Displaying items 181-203 of 203 in total

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