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SCNpilot_bf_inoc_scaffold_162_curated

Search features with annotation key words

Displaying items 61-90 of 157 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_162_curated_61
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(74165..75589)
DNA (1425bp) protein (475aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2AVL9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS16265.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
hypothetical protein rbh
SCNpilot_bf_inoc_scaffold_162_curated_62
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(75609..77465)
DNA (1857bp) protein (619aa)
Uncharacterized protein n=1 Tax=Bacteroides thetaiotaomicron dnLKV9 RepID=R9HC64_BACT4
Uncharacterized protein {ECO:0000313|EMBL:EOS01638.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
hypothetical protein rbh
SCNpilot_bf_inoc_scaffold_162_curated_63
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(77477..80869)
DNA (3393bp) protein (1131aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K6AQ22_9PORP
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EKN17803.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
hypothetical protein rbh
SCNpilot_bf_inoc_scaffold_162_curated_64
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(81011..82195)
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000362EB7D
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:CEA15104.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
sigma factor regulatory protein, FecR/PupR family
SCNpilot_bf_inoc_scaffold_162_curated_65
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(82409..82720)
DNA (312bp) protein (104aa)
id=4154242 bin=GWF2_Bacteroidetes_33_38 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
Tax=GWF2_Bacteroidetes_33_38_curated
SCNpilot_bf_inoc_scaffold_162_curated_66
unknown

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comp(82720..82932)
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_162_curated_67
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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83192..83761
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000367B7B5
Strain DSM 12611 Contig07, whole genome shotgun sequence {ECO:0000313|EMBL:KIO53285.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_162_curated_68
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(83766..84314)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000362E912
Uncharacterized protein {ECO:0000313|EMBL:CEA15105.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
RNA polymerase ECF-type sigma factor
SCNpilot_bf_inoc_scaffold_162_curated_69
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(84445..85674)
DNA (1230bp) protein (410aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003672107
amino acid carrier protein; K03310 alanine or glycine:cation symporter, AGCS family
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_162_curated_70
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

86003..86578
DNA (576bp) protein (192aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
sod; superoxide dismutase Fe-Mn; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000382010A
SCNpilot_bf_inoc_scaffold_162_curated_71
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(86650..86964)
DNA (315bp) protein (105aa)
Thioredoxin id=1730885 bin=GWD2_Bacteroidales_45_23 species=unknown genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
thioredoxin; K03671 thioredoxin 1
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_162_curated_72
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(87057..90845)
DNA (3789bp) protein (1263aa)
DNA polymerase III subunit alpha; K02337 DNA polymerase III subunit alpha [EC:2.7.7.7]
Putative uncharacterized protein id=4483070 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_162_curated_73
Porphyromonas gulae, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(90929..92473)
DNA (1545bp) protein (515aa)
symporter n=1 Tax=Porphyromonas gulae RepID=UPI00037D2125
Symporter {ECO:0000313|EMBL:KGN92647.1}; TaxID=111105 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gulae.;"
putative H+/peptide symporter; K03305 proton-dependent oligopeptide transporter, POT family
SCNpilot_bf_inoc_scaffold_162_curated_74
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

92837..93682
DNA (846bp) protein (282aa)
prephenate dehydratase (EC:4.2.1.51); K04518 prephenate dehydratase [EC:4.2.1.51]
Prephenate dehydratase id=4483063 bin=GWC2_Bacteroidetes_46_850 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_162_curated_75
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

93719..94921
DNA (1203bp) protein (401aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003764D03
Uncharacterized protein {ECO:0000313|EMBL:CEA16786.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
aminotransferase
SCNpilot_bf_inoc_scaffold_162_curated_76
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

94926..95996
DNA (1071bp) protein (357aa)
chorismate mutase; K04516 chorismate mutase [EC:5.4.99.5]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037DD386
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_162_curated_77
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

96002..96775
DNA (774bp) protein (258aa)
prephenate dehydrogenase (EC:1.3.1.12)
Putative uncharacterized protein id=4483054 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_162_curated_78
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(96789..97598)
DNA (810bp) protein (270aa)
peptidyl-prolyl cis-trans isomerase cyclophilin type id=1730870 bin=GWD2_Bacteroidales_45_23 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
cyclophilin type peptidyl-prolyl cis-trans isomerase
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_162_curated_79
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(97643..98737)
DNA (1095bp) protein (365aa)
Putative uncharacterized protein id=1730868 bin=GWD2_Bacteroidales_45_23 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_162_curated_80
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(98773..99903)
DNA (1131bp) protein (377aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
tRNA-guanine transglycosylase; K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] rbh
Queuine tRNA-ribosyltransferase id=4483044 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
SCNpilot_bf_inoc_scaffold_162_curated_81
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

100344..102575
DNA (2232bp) protein (744aa)
glycosyl transferase n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237D1C2
Glycosyl transferase group 1 {ECO:0000313|EMBL:EHQ28470.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
group 1 glycosyl transferase
SCNpilot_bf_inoc_scaffold_162_curated_82
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

102572..103582
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6AKE1_DESPS
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAG37184.1}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea.;" source="Desulfotalea psychrophila (strain LSv54 / DSM 12343).;"
SCNpilot_bf_inoc_scaffold_162_curated_83
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(103788..105254)
DNA (1467bp) protein (489aa)
hypothetical protein n=1 Tax=Cloacimonetes bacterium SCGC AAA255-B16 RepID=UPI000380631D
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAG37189.1}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea.;" source="Desulfotalea psychrophila (strain LSv54 / DSM 12343).;"
SCNpilot_bf_inoc_scaffold_162_curated_84
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

105628..106524
DNA (897bp) protein (299aa)
lipoyl synthase (EC:2.8.1.8); K03644 lipoic acid synthetase [EC:2.8.1.8]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037BC5C8
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_162_curated_85
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

106541..107230
DNA (690bp) protein (230aa)
Octanoyltransferase (EC:2.3.1.181); K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035F4184
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_162_curated_86
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

107395..108390
DNA (996bp) protein (332aa)
magnesium chelatase subunit I; K03924 MoxR-like ATPase [EC:3.6.3.-]
Magnesium chelatase subunit I id=4483034 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_162_curated_87
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

108424..109293
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000363C18B
Uncharacterized protein {ECO:0000313|EMBL:CEA16777.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_162_curated_88
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

109296..110321
DNA (1026bp) protein (342aa)
Putative uncharacterized protein id=1730831 bin=GWD2_Bacteroidales_45_23 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_162_curated_89
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

110353..111336
DNA (984bp) protein (328aa)
Putative uncharacterized protein id=1730829 bin=GWD2_Bacteroidales_45_23 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein; K07114 uncharacterized protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_162_curated_90
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

111368..112390
DNA (1023bp) protein (341aa)
Putative uncharacterized protein id=4482928 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
aerotolerance-related membrane protein; K07114 uncharacterized protein
Tax=GWC2_Bacteroidetes_46_850_curated
Displaying items 61-90 of 157 in total

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