ggKbase home page

SCNpilot_bf_inoc_scaffold_344_curated

Search features with annotation key words

Displaying items 31-52 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_344_curated_31
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31500..32294
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036FF7BD
cytochrome c biogenesis protein CcsA rbh
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_344_curated_32
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32383..33675
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TJW8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY81441.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_344_curated_33
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33678..34439)
DNA (762bp) protein (254aa)
truA; tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036FF4BF
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_344_curated_34
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34450..35136)
DNA (687bp) protein (229aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WWG0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK06294.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_344_curated_35
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35147..35917)
DNA (771bp) protein (257aa)
DNA polymerase III subunit epsilon; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7]
DNA polymerase III subunit epsilon n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000376931D
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_344_curated_36
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35921..37045)
DNA (1125bp) protein (375aa)
DNA polymerase III subunit beta; K02338 DNA polymerase III subunit beta [EC:2.7.7.7]
DNA polymerase III subunit beta id=4879466 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_344_curated_37
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37145..38041)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036AD122
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
tyrosine type site-specific recombinase; K04763 integrase/recombinase XerD
SCNpilot_bf_inoc_scaffold_344_curated_38
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38045..40537)
DNA (2493bp) protein (831aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037DA495
two-component system sensor histidine kinase
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_344_curated_39
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40542..41828)
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000372EE47
Uncharacterized protein {ECO:0000313|EMBL:CEA15939.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
Fis family transcriptional regulator; K07713 two-component system, NtrC family, response regulator HydG
SCNpilot_bf_inoc_scaffold_344_curated_40
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41831..42178)
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003613930
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_344_curated_41
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42278..42577)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000362C02A
septum formation initiator-related protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_344_curated_42
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42833..44473
DNA (1641bp) protein (547aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035EF838
peptidase, C69 family
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_344_curated_43
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

44497..46248
DNA (1752bp) protein (584aa)
phosphoglucomutase phosphomannomutase; K01840 phosphomannomutase [EC:5.4.2.8]
Putative uncharacterized protein id=1922404 bin=GWD2_Bacteroidales_45_23 species=Tannerella sp. 6_1_58FAA_CT1 genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_344_curated_44
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

46313..46762
DNA (450bp) protein (150aa)
methylglyoxyl synthase; K01734 methylglyoxal synthase [EC:4.2.3.3]
methylglyoxal synthase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035E5E2D
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_344_curated_45
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(46775..48901)
DNA (2127bp) protein (709aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000371A8FA
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_344_curated_46
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(48926..50422)
DNA (1497bp) protein (499aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00038032B2
Uncharacterized protein {ECO:0000313|EMBL:CEA15946.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
polysaccharide biosynthesis protein
SCNpilot_bf_inoc_scaffold_344_curated_47
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


50824..52368
DNA (1545bp) protein (515aa)
glycyl-tRNA synthetase (EC:6.1.1.14)
glycyl-tRNA synthetease n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036D442E
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_344_curated_48
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

52377..52934
DNA (558bp) protein (186aa)
FKBP-type peptidyl-prolyl cis-trans isomerase 1; K01802 peptidylprolyl isomerase [EC:5.2.1.8]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000377447B
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_344_curated_49
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(52942..54399)
DNA (1458bp) protein (486aa)
d-alanyL-d-alaninecarboxypeptidase/d-alanyL-d-alanine-endopeptidase (EC:3.4.16.4); K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003656CEA
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_344_curated_50
unknown

Not on your lists

comp(54605..54922)
DNA (318bp) protein (106aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_344_curated_51
unknown

Not on your lists

comp(55053..55244)
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_344_curated_52
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(55388..56014)
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035C9685
Putative secreted protein {ECO:0000313|EMBL:CEA15952.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
Displaying items 31-52 of 52 in total

View Taxonomy