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SCNpilot_bf_inoc_scaffold_484_curated_2

Organism: scnpilot_dereplicated_Bacteroidia_1

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(866..1855)

Top 3 Functional Annotations

Value Algorithm Source
Collagen triple helix repeat-containing protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RSG0_LEAB4 similarity UNIREF
DB: UNIREF100
  • Identity: 52.8
  • Coverage: 178.0
  • Bit_score: 188
  • Evalue 8.30e-45
collagen triple helix repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 178.0
  • Bit_score: 188
  • Evalue 2.60e-45
Collagen triple helix repeat-containing protein {ECO:0000313|EMBL:ADQ17696.1}; Flags: Precursor;; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.8
  • Coverage: 178.0
  • Bit_score: 188
  • Evalue 1.20e-44

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Taxonomy

Leadbetterella byssophila → Leadbetterella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 990
ATGAAAGTATTCAAATTTTTCGGTATTGCCGCCGTTCTTGTCATCCTTTCAATGAATCCAGGGTGCATAGGGGATGAAGGACCGATGGGAATTCAGGGCGAGCAAGGACTACCCGGGATAGACGGCGTCATGTTCCATTCGGGTGATGTGCCTCCAACAGCCGCGATTGGCCGTGACGGAGACATGTATGTCGATAAGCTTGCCGCTACGCTTTACGGCCCCAAACTATCCGGCAACTGGGGAGCGGGCGTACCGTTGAAGGGCGTCGCCGGAACCGCCGGATCCCAAGGTCCACAAGGTCCACAAGGTCCACAAGGTCCACAAGGTCCACAAGGGAATACAGGACCACAGGGTGTTGCCGGGAAGCAAGGTCCCGCAGGTGTGCCGGGCAGTAAGATATTGTCGGGTAACGGAACTCCCCAGCAGTCGTTGGGAGCGACAGGAGATTATTATCTGGACAAGACGAACGGATTGCTTTACGGACCCAAAATGACCTCAAGCTGGGGAACACCTTTTAACCTGAAAGGGCCCAAGGGTGATAAAGGCGACAAAGGCGATCAAGGAGTTAAAGGTGACAAGGGTGACAAGGGTGATAAAGGCGATCCCGGCACGGCAAACGTAATTTATAGTGACTGGATGCGTATTTCCACCGTTGATTATCTGCTCTACTATTCTCTCAATGTTCCGGAAATCACACAGCAAATTATTGATAGAGGTGTTGTGATTGTTTATCAAAAAGTAACTTACCAAAATAACAATGAATATATCATCCAATTGAGTCATGAGACGGAGCCATATTCCTTTATGGCAAGACTTTCAACAATTGAATTTCAAAGTTATTACCGGAGCGGTAACGCCGTTGGTCCACCTTCCCTTGGTAATTTGGTATTCCGCTACGTTATCATTCCGGGTGGTGTGCCATCAACCAGGAGCAGTGTAGATTTCAGCAATTACGAGGATGTGAGGCGGGCATTCGGAATCATAGATTGA
PROTEIN sequence
Length: 330
MKVFKFFGIAAVLVILSMNPGCIGDEGPMGIQGEQGLPGIDGVMFHSGDVPPTAAIGRDGDMYVDKLAATLYGPKLSGNWGAGVPLKGVAGTAGSQGPQGPQGPQGPQGPQGNTGPQGVAGKQGPAGVPGSKILSGNGTPQQSLGATGDYYLDKTNGLLYGPKMTSSWGTPFNLKGPKGDKGDKGDQGVKGDKGDKGDKGDPGTANVIYSDWMRISTVDYLLYYSLNVPEITQQIIDRGVVIVYQKVTYQNNNEYIIQLSHETEPYSFMARLSTIEFQSYYRSGNAVGPPSLGNLVFRYVIIPGGVPSTRSSVDFSNYEDVRRAFGIID*