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SCNpilot_bf_inoc_scaffold_720_curated_12

Organism: scnpilot_dereplicated_Bacteroidia_1

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(12557..13984)

Top 3 Functional Annotations

Value Algorithm Source
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Bacteroides coprosuis DSM 18011 RepID=F3ZU98_9BACE similarity UNIREF
DB: UNIREF100
  • Identity: 63.6
  • Coverage: 472.0
  • Bit_score: 605
  • Evalue 4.10e-170
RND efflux system {ECO:0000313|EMBL:GAE85383.1}; TaxID=1445607 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides reticulotermitis JCM 10512.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.9
  • Coverage: 475.0
  • Bit_score: 684
  • Evalue 9.80e-194
rnd efflux system, outer membrane lipoprotein, nodt family similarity KEGG
DB: KEGG
  • Identity: 48.0
  • Coverage: 479.0
  • Bit_score: 422
  • Evalue 1.50e-115

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Taxonomy

Bacteroides reticulotermitis → Bacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1428
ATGAATAATAGATATAAAAAGAGAATTGTACTGTTTTTGGGGCTTGTGGTCCTGATGGGATTTCCATCCTGTCAGGTACTGAACAGATACCGGTCGCCCGAGATAGACAGTGAAAATTTATTCAGGGACGAAAATCCGCTGGATACCACAACGATTGCCAATATACCGTGGAGAGAGTTTTTTACGGATACGTTTCTGCAATCCTATATTGATGAAGCGTTGATAAATAATTTTGATATGCTGATCGCCGAGGAATGCATTAAGCAGGCTGAAGCGGTTTTAGGAATGGCCCGTGCAGCTTATTTCCCCGATATCGCTTTAAACGCGCAAGTTACCCAGACCCGATTAAGCAATAGGGATCCGTTAACGGGTGCGTCGAAAGATCAGAAAAACCTAGGGTATCACTCCGAGAATTATTCGTTAGGCATTGTTGCCGGATGGGAGCTCGATCTGTGGGGTAAGATGAGGAGCGAATCCCGCTCGAAATATGCTCAGATGTTGAACAGTTACGCCGGGCGGAATCTTCTGCAAACCTCATTGATCTCCAATATTGCCAATACGTATTACGCATTGGTAGCTTTGGATGAACAGTTGAAAGTGACTAACGATGTGATCTTGTTGATGGAAGAGAACCTCGTTACCACTCGGGCCCTGAAGGAAGCGGGAATGACCAACGAAGCTGCGGTTGAGCAAGTCAGGGCTGTATTGGCAAGCGCCAGGACTTCCGTTCCCGATTTGGAAAGCAATATCAGGCAGCTCGAAAATGCCATTTGTACGATGTTGGGCCGCAAGCCGGGCCCGGTAGCAAGGGCTGCCATTTCGGAGCAGAGGCTACCGGATGAGTTTGCCCATGGAATACCGGCTCAGATGCTTTCGCGTCGTCCCGATGTCAATCGGGCGGAGTTGCAATTCCGTTCGGCATACGAATTAACCAATGTTGCCAAAGCGAGCTTCTATCCTACCATCAGTTTAACATCCGGCGTGATCGGGTACTCTACGGTAAACGGATTGGAAAGCTTTTTCAAACCGGAAAACTTGTTTGCCAGCATAGCCGGAGGATTAACTCAACCGATATTTGCGCGCAAGCAATTGACAACGCAATATAAGACTGCCAAATCGGAACAGAAAATAGCTTTGCTCAATTTTGAAAAGACGGTAATATCCGCCGGTCAAGAGGTTTCGGATATCTTGTACACTTATGAGTCGTCGTTAAGGAAAAGCCGCGACAGAAAAGTGCAGGTTGAAGCATTGGACAAAGCAGTTTATTACACTCAGGAATTATTGAAAGCAGGGGAAGCCAATTACCTGGAGGTCCTTACCGCCCAACAAAGTCTGTTACAGGCTAAGTTGGACCAGGTGAGTGACAAATTACAACAGCTTCAATCGGCATCCGATCTGTACAGGGCATTGGGCGGCGGAGTTGAATGA
PROTEIN sequence
Length: 476
MNNRYKKRIVLFLGLVVLMGFPSCQVLNRYRSPEIDSENLFRDENPLDTTTIANIPWREFFTDTFLQSYIDEALINNFDMLIAEECIKQAEAVLGMARAAYFPDIALNAQVTQTRLSNRDPLTGASKDQKNLGYHSENYSLGIVAGWELDLWGKMRSESRSKYAQMLNSYAGRNLLQTSLISNIANTYYALVALDEQLKVTNDVILLMEENLVTTRALKEAGMTNEAAVEQVRAVLASARTSVPDLESNIRQLENAICTMLGRKPGPVARAAISEQRLPDEFAHGIPAQMLSRRPDVNRAELQFRSAYELTNVAKASFYPTISLTSGVIGYSTVNGLESFFKPENLFASIAGGLTQPIFARKQLTTQYKTAKSEQKIALLNFEKTVISAGQEVSDILYTYESSLRKSRDRKVQVEALDKAVYYTQELLKAGEANYLEVLTAQQSLLQAKLDQVSDKLQQLQSASDLYRALGGGVE*