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SCNpilot_bf_inoc_scaffold_379_curated_56

Organism: scnpilot_dereplicated_Bacteroidia_1

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(64141..64482)

Top 3 Functional Annotations

Value Algorithm Source
Small multidrug resistance protein {ECO:0000313|EMBL:CEA04464.1}; TaxID=1461581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 12M76_air.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.5
  • Coverage: 110.0
  • Bit_score: 132
  • Evalue 3.40e-28
Small multidrug resistance protein id=1922353 bin=GWD2_Bacteroidales_45_23 species=Dyadobacter fermentans genus=Dyadobacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 53.6
  • Coverage: 110.0
  • Bit_score: 129
  • Evalue 1.60e-27
small multidrug resistance protein; K11741 quaternary ammonium compound-resistance protein SugE similarity KEGG
DB: KEGG
  • Identity: 52.7
  • Coverage: 112.0
  • Bit_score: 122
  • Evalue 1.00e-25

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Taxonomy

Pseudomonas sp. 12M76_air → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 342
ATGATGAATTGGATATTTCTTATTGTTGGCGGATTGTTTGAAGCTGTTTTTGCCTTCAGTCTGGAAAGAGTATCGGTAAGCACCGGTAAAACGGCCGTCATGTGGTTTCTGTCATTTCTGGCCAGCGTTTCCATCAGTATGTTTTTACTTTTCAAGGCGATAAGCGGCGAAAATGCCGTGGCCATAGGTACGGGATACGCCGTGTGGGGTGGGATTGGCGCAGTGTTTACGGTATTGGCCGGTATTCTTTTCCTGGGAGAGTCCACTGCCTTCTGGCGGATCTTTTTCCTTTGTACCCTGGTCTTGTCAATTATCGGGCTGAATCTGGTGTCCAGACAATAA
PROTEIN sequence
Length: 114
MMNWIFLIVGGLFEAVFAFSLERVSVSTGKTAVMWFLSFLASVSISMFLLFKAISGENAVAIGTGYAVWGGIGAVFTVLAGILFLGESTAFWRIFFLCTLVLSIIGLNLVSRQ*