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SCNpilot_bf_inoc_scaffold_379_curated_64

Organism: scnpilot_dereplicated_Bacteroidia_1

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: 72756..73328

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor (Fragment) n=1 Tax=Bacteroides pyogenes F0041 RepID=U2DNA4_9BACE similarity UNIREF
DB: UNIREF100
  • Identity: 47.0
  • Coverage: 181.0
  • Bit_score: 163
  • Evalue 2.80e-37
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:ERI81166.1}; Flags: Fragment;; TaxID=1321819 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides pyogenes F0041.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.0
  • Coverage: 181.0
  • Bit_score: 163
  • Evalue 4.00e-37
RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 42.5
  • Coverage: 181.0
  • Bit_score: 145
  • Evalue 1.50e-32

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Taxonomy

Bacteroides pyogenes → Bacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 573
ATGGATAGTGAATATTTTAAAATAATATATAAGAAATACTTCAATGTGCTTCATGCTTATTCACTTCGTATTGTGCTGAACGAAGAAGTGGCGGAGGATATTGTGCAGGAAGTATTTCTGGAGTGTTGGAACCGGCGCAGGTCGATAGATGTGGCTAAATCCATGAAGCCTTATCTATATACGTTGGCCCGCACGAAGAGCATCGATTATTTAAGGAAAGCAGAGAATAAGAACCTCTCGTTCTCTGAGGTTGAAACTCGTCTGGACCAGCTCTTTTTTGAAACACTTGCGTTGGATGACCCTGTTGATACCGGGGAGATGGGGCAGATCATTGAGAAAACCATCCTGTCGTTGCCTCCAAAATGCAAAAAAGTTTTTCTGTTAAGCCGGAAAAACGGAATGAAGAACAAACAGATAGCCGAACTCCTCGATCTTAGTGTGAAGGCCGTTGAGAAACACATCACCAAAGCTGTAAAACAGATTCGATTGGTACTGGAAGAAAAAGGGTACCTGCCTTTTTTTCTTATTTTTTTCTTATCTTTTTACAAAACGTGGAGAATATTTCCGTTTTGA
PROTEIN sequence
Length: 191
MDSEYFKIIYKKYFNVLHAYSLRIVLNEEVAEDIVQEVFLECWNRRRSIDVAKSMKPYLYTLARTKSIDYLRKAENKNLSFSEVETRLDQLFFETLALDDPVDTGEMGQIIEKTILSLPPKCKKVFLLSRKNGMKNKQIAELLDLSVKAVEKHITKAVKQIRLVLEEKGYLPFFLIFFLSFYKTWRIFPF*