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SCNpilot_bf_inoc_scaffold_838_curated

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Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_838_curated_1
Mariniradius saccharolyticus, Mariniradius, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

641..1462
DNA (822bp) protein (274aa)
Competence protein n=1 Tax=Mariniradius saccharolyticus AK6 RepID=M7XHB0_9BACT
Competence protein {ECO:0000313|EMBL:EMS33913.1}; TaxID=1239962 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Mariniradius.;" source="Mariniradius saccharolyticus AK6.;"
competence protein
SCNpilot_bf_inoc_scaffold_838_curated_2
Porphyromonadaceae bacterium COT-184 OH4590, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1825..2463
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0IXM7_CYCMS
Uncharacterized protein {ECO:0000313|EMBL:KGN79383.1}; TaxID=1517682 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium COT-184 OH4590.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_838_curated_3
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2630..3118
DNA (489bp) protein (163aa)
Uncharacterized protein {ECO:0000313|EMBL:CEA17010.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
id=1838897 bin=GWD2_Bacteroidales_45_23 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
SCNpilot_bf_inoc_scaffold_838_curated_4
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3130..3717
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037194CE
Uncharacterized protein {ECO:0000313|EMBL:CEA15296.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
Chitinase class I
SCNpilot_bf_inoc_scaffold_838_curated_5
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3730..4308
DNA (579bp) protein (193aa)
Uncharacterized protein {ECO:0000313|EMBL:CEA17012.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
id=4595958 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
SCNpilot_bf_inoc_scaffold_838_curated_6
RIFOXYC2_FULL_RIF_OD1_09_47_9_curated, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(4594..6372)
DNA (1779bp) protein (593aa)
ATP-dependent OLD family endonuclease n=1 Tax=Escherichia coli SCI-07 RepID=H8DHC5_ECOLX
nuclease, ATP-dependent, OLD family
Tax=RIFOXYC2_FULL_RIF_OD1_09_47_9_curated
SCNpilot_bf_inoc_scaffold_838_curated_7
Marinobacter sp. BSs20148, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6423..7322)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Marinobacter sp. BSs20148 RepID=M1FJZ1_9ALTE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFP30988.1}; TaxID=490759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sp. BSs20148.;"
SCNpilot_bf_inoc_scaffold_838_curated_8
BJP_IG2102_Bacteroidetes_40_12, Bacteroidetes, Bacteria

Not on your lists

comp(7457..8203)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B7673C
hypothetical protein
Tax=BJP_IG2102_Bacteroidetes_40_12
SCNpilot_bf_inoc_scaffold_838_curated_9
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8406..9824)
DNA (1419bp) protein (473aa)
Site-specific recombinase, phage integrase family id=2063242 bin=GWD2_Bacteroidales_45_23 species=Bacteroides clarus genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Site-specific recombinase XerD
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_838_curated_10
Sphingobacterium sp. ACCC 05744, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(10663..11556)
DNA (894bp) protein (298aa)
Transcriptional regulator, AraC family n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RUS9_LEAB4
Transcriptional regulator, AraC family {ECO:0000313|EMBL:KGE13701.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ACCC 05744.;"
transcriptional regulator, arac family
SCNpilot_bf_inoc_scaffold_838_curated_11
Triticum urartu, Triticum, Poales, commelinids, Streptophyta, Viridiplantae

Not on your lists

11751..12902
DNA (1152bp) protein (384aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000374F9C2
Uncharacterized protein {ECO:0000313|EnsemblPlants:TRIUR3_34057-P1}; TaxID=4572 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum.;" source="Triticum urartu (Red wild einkorn) (Crithodium urartu).;"
aldo/keto reductase
SCNpilot_bf_inoc_scaffold_838_curated_12
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

12910..14115
DNA (1206bp) protein (402aa)
UPI0003CEB5B8 related cluster n=1 Tax=unknown RepID=UPI0003CEB5B8
aldo/keto reductase
Tax=GWC2_Nitrospirae_57_9_curated
SCNpilot_bf_inoc_scaffold_838_curated_13
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14149..14487
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CEL9_SPHS2
Flavodoxin {ECO:0000313|EMBL:KGO90974.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_838_curated_14
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14492..15223
DNA (732bp) protein (244aa)
Uncharacterized protein, gamma-carboxymuconolactone decarboxylase subunit like protein n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z7A0_BELBD
Carboxymuconolactone decarboxylase {ECO:0000313|EMBL:AHW60903.1}; TaxID=1168034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium orientale.;"
gamma-carboxymuconolactone decarboxylase subunit like protein
SCNpilot_bf_inoc_scaffold_838_curated_15
Belliella baltica, Belliella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

15267..16298
DNA (1032bp) protein (344aa)
Alpha/beta superfamily hydrolase n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z799_BELBD
alpha/beta superfamily hydrolase
Alpha/beta superfamily hydrolase {ECO:0000313|EMBL:AFL85117.1}; Flags: Precursor;; TaxID=866536 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Belliella.;" source="Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134).;"
SCNpilot_bf_inoc_scaffold_838_curated_16
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16306..16788
DNA (483bp) protein (161aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CEL4_SPHS2
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ADZ76709.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_bf_inoc_scaffold_838_curated_17
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16882..17079
DNA (198bp) protein (66aa)
tetracycline resistance element mobilization regulatory protein RteC n=1 Tax=Empedobacter brevis RepID=UPI00036FF696
tetracycline regulation of excision RteC
Uncharacterized protein {ECO:0000313|EMBL:GAE64117.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
SCNpilot_bf_inoc_scaffold_838_curated_18
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17022..17585
DNA (564bp) protein (188aa)
Tetracycline regulation of excision, RteC n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C771_SPHS2
tetracycline regulation of excision RteC
Tetracycline regulation of excision, RteC {ECO:0000313|EMBL:ADZ80146.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_bf_inoc_scaffold_838_curated_19
unknown

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17921..18157
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036DE35A
SCNpilot_bf_inoc_scaffold_838_curated_20
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18132..18428
DNA (297bp) protein (99aa)
Plasmid stabilization system protein, RelE/ParE family n=1 Tax=Capnocytophaga sp. oral taxon 326 str. F0382 RepID=L1PQP0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KEY18865.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
plasmid stabilization system
SCNpilot_bf_inoc_scaffold_838_curated_21
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(18545..19264)
DNA (720bp) protein (240aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X0G6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK03861.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
DSBA oxidoreductase
SCNpilot_bf_inoc_scaffold_838_curated_22
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19380..20480)
DNA (1101bp) protein (367aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IXD4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02117.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
putative oxidoreductase
SCNpilot_bf_inoc_scaffold_838_curated_23
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20947..22260
DNA (1314bp) protein (438aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IV85_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02535.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
outer membrane protein
SCNpilot_bf_inoc_scaffold_838_curated_24
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22276..23364
DNA (1089bp) protein (363aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X1H9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05963.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
RND family efflux transporter, MFP subunit
SCNpilot_bf_inoc_scaffold_838_curated_25
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23373..26585
DNA (3213bp) protein (1071aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IV83_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02533.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
cation/multidrug efflux pump
SCNpilot_bf_inoc_scaffold_838_curated_26
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26582..26893
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IV82_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02532.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
SCNpilot_bf_inoc_scaffold_838_curated_27
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26896..27081
DNA (186bp) protein (62aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IV81_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02531.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_838_curated_28
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27105..27479)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RJC8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA56157.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
regulatory protein MarR
SCNpilot_bf_inoc_scaffold_838_curated_29
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27867..28364)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000382C695
activator of Hsp90 ATPase 1 family protein
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:ADZ81522.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_bf_inoc_scaffold_838_curated_30
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28709..29713)
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000378353B
Ferric reductase like transmembrane component family protein {ECO:0000313|EMBL:EQK39370.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
hypothetical protein
Displaying items 1-30 of 46 in total

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