ggKbase home page

SCNpilot_bf_inoc_scaffold_184_curated

Search features with annotation key words

Displaying items 121-150 of 157 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_184_curated_121
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

180314..182617
DNA (2304bp) protein (768aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037E5C6C
Uncharacterized protein {ECO:0000313|EMBL:EOS15091.1}; TaxID=1235788 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis dnLKV3.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_184_curated_122
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(182638..183024)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000368DAA8
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_184_curated_123
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(183033..183392)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003636D5B
Uncharacterized protein {ECO:0000313|EMBL:CEA16678.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
Interferon-induced transmembrane protein.
SCNpilot_bf_inoc_scaffold_184_curated_124
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(183411..183974)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003696A94
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_184_curated_125
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(183985..184386)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000362DD7D
Uncharacterized protein {ECO:0000313|EMBL:CEA16680.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_184_curated_126
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(184578..184985)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IS57_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EES66426.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
transcriptional regulator
SCNpilot_bf_inoc_scaffold_184_curated_127
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(185032..185421)
DNA (390bp) protein (130aa)
Uncharacterized protein n=2 Tax=Bacteroides ovatus RepID=I8XX33_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY61251.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_184_curated_128
unknown

Not on your lists

comp(185445..185588)
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_184_curated_129
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

185625..188654
DNA (3030bp) protein (1010aa)
TonB-linked outer membrane protein, SusC/RagA family n=3 Tax=Parabacteroides RepID=A7ABX4_9PORP
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDN87757.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_184_curated_130
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

188667..190445
DNA (1779bp) protein (593aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K6ACF8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN13363.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_184_curated_131
unknown

Not on your lists

190509..190619
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_184_curated_132
Bacteroides coprosuis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(190638..191669)
DNA (1032bp) protein (344aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Bacteroides coprosuis DSM 18011 RepID=F3ZR35_9BACE
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:EGJ70628.1}; Flags: Precursor;; TaxID=679937 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprosuis DSM 18011.;"
hypothetical protein rbh
SCNpilot_bf_inoc_scaffold_184_curated_133
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(191675..193021)
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VSB3_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EFK56664.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
extracellular nuclease
SCNpilot_bf_inoc_scaffold_184_curated_134
Bacteroides coprosuis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(193072..195813)
DNA (2742bp) protein (914aa)
TonB-dependent receptor n=1 Tax=Bacteroides propionicifaciens RepID=UPI0003799A31
TonB-dependent receptor {ECO:0000313|EMBL:EGJ70626.1}; Flags: Precursor;; TaxID=679937 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprosuis DSM 18011.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_184_curated_135
Bacteroides coprosuis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(195913..198207)
DNA (2295bp) protein (765aa)
Nucleic acid binding OB-fold tRNA/helicase-type n=1 Tax=Bacteroides coprosuis DSM 18011 RepID=F3ZR31_9BACE
Nucleic acid binding OB-fold tRNA/helicase-type {ECO:0000313|EMBL:EGJ70624.1}; Flags: Precursor;; TaxID=679937 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprosuis DSM 18011.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_184_curated_136
Odoribacter laneus CAG:561, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(198280..199908)
DNA (1629bp) protein (543aa)
Uncharacterized protein n=1 Tax=Odoribacter laneus CAG:561 RepID=R5UYU4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCZ80939.1}; TaxID=1263089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter laneus CAG:561.;"
DNA/RNA non-specific endonuclease; K01173 endonuclease G, mitochondrial
SCNpilot_bf_inoc_scaffold_184_curated_137
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(200094..200291)
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037CB37B
Uncharacterized protein {ECO:0000313|EMBL:EGK01429.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
SCNpilot_bf_inoc_scaffold_184_curated_138
Bacteroides oleiciplenus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

200419..201105
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Bacteroides oleiciplenus YIT 12058 RepID=K9EHA5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKU90317.1}; TaxID=742727 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides oleiciplenus YIT 12058.;"
SCNpilot_bf_inoc_scaffold_184_curated_139
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

201264..202031
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Clostridium thermocellum BC1 RepID=U4MUS9_CLOTM
Uncharacterized protein {ECO:0000313|EMBL:KJS18761.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
transcriptional regulator
SCNpilot_bf_inoc_scaffold_184_curated_140
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(202248..203576)
DNA (1329bp) protein (443aa)
dGTP triphosphohydrolase; K01129 dGTPase [EC:3.1.5.1]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003721B98
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_184_curated_141
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

203924..205852
DNA (1929bp) protein (643aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037EEA69
phosphoribosylpyrophosphate amidotransferase
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_184_curated_142
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

205849..206781
DNA (933bp) protein (311aa)
phosphate starvation-inducible phoH n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003672D03
phosphate starvation-inducible protein PhoH; K06217 phosphate starvation-inducible protein PhoH and related proteins
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_184_curated_143
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

207006..207950
DNA (945bp) protein (315aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase; K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037147D7
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_184_curated_144
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

207986..208732
DNA (747bp) protein (249aa)
ubiE; ubiquinone/menaquinone biosynthesis methyltransferase; K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003703E77
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_184_curated_145
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

208856..209617
DNA (762bp) protein (254aa)
shikimate 5-dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25] rbh
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037799F8
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_184_curated_146
unknown

Not on your lists

comp(209572..209676)
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_184_curated_147
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(209739..210374)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003637140
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_184_curated_148
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

210791..213253
DNA (2463bp) protein (821aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003724BE9
Uncharacterized protein {ECO:0000313|EMBL:CEA16688.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
two-component hybrid sensor kinase/response regulator
SCNpilot_bf_inoc_scaffold_184_curated_149
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(213284..214642)
DNA (1359bp) protein (453aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036C69E5
two-component system response regulator; K07713 two-component system, NtrC family, response regulator HydG
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_184_curated_150
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

214725..215897
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000373958C
peptidase M24
Tax=GWC2_Bacteroidetes_46_850_curated
Displaying items 121-150 of 157 in total

View Taxonomy