ggKbase home page

SCNpilot_bf_inoc_scaffold_434_curated

Search features with annotation key words

Displaying items 91-120 of 128 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_434_curated_91
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

110806..112128
DNA (1323bp) protein (441aa)
membrane-associated zinc metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000361CE39
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_434_curated_92
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

112190..113167
DNA (978bp) protein (326aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
5,10-methylenetetrahydrofolate reductase; K00297 methylenetetrahydrofolate reductase (NADPH) [EC:1.5.1.20]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003769A1A
SCNpilot_bf_inoc_scaffold_434_curated_93
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

113167..114276
DNA (1110bp) protein (370aa)
putative DNA polymerase III delta prime subunit; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000367C6F5
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_434_curated_94
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

114384..115571
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000365A541
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_434_curated_95
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

115564..116031
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036F494A
Putative membrane protein {ECO:0000313|EMBL:CEA15166.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
gliding motility-associated lipoprotein gldh
SCNpilot_bf_inoc_scaffold_434_curated_96
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

116044..116808
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000382C2C3
Uncharacterized protein {ECO:0000313|EMBL:CEA15167.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_434_curated_97
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

116961..117191
DNA (231bp) protein (77aa)
photosystem I iron-sulfur center family protein; K00176 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
ferredoxin n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003615512
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_434_curated_98
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

117229..118311
DNA (1083bp) protein (361aa)
2-ketoisovalerate ferredoxin reductase (EC:1.2.7.7); K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3]
2-ketoisovalerate ferredoxin reductase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037D5230
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_434_curated_99
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

118326..118487
DNA (162bp) protein (54aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037F8B5F
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_434_curated_100
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

118683..119444
DNA (762bp) protein (254aa)
2-oxoglutarate oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3]
2-oxoglutarate oxidoreductase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000375E7AB
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_434_curated_101
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

119444..120013
DNA (570bp) protein (190aa)
ketoisovalerate oxidoreductase subunit vorA; K00177 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
2-oxoglutarate ferredoxin oxidoreductase subunit gamma n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036649D9
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_434_curated_102
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(120014..121675)
DNA (1662bp) protein (554aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035DA196
dead/deah box helicase domain protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_434_curated_103
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

121818..122009
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AFV2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86008.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
SCNpilot_bf_inoc_scaffold_434_curated_104
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

122172..123398
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Bacteroides cellulosilyticus CL02T12C19 RepID=I8WBS4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY36075.1}; TaxID=997874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus CL02T12C19.;"
Site-specific recombinase XerD
SCNpilot_bf_inoc_scaffold_434_curated_105
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

123473..123979
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Bacteroides cellulosilyticus CL02T12C19 RepID=I9R022_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY35581.1}; TaxID=997874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus CL02T12C19.;"
ORF6N domain.
SCNpilot_bf_inoc_scaffold_434_curated_106
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

124238..124690
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Bacteroides cellulosilyticus CL02T12C19 RepID=I8WCN4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY35582.1}; TaxID=997874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus CL02T12C19.;"
DNA repair protein
SCNpilot_bf_inoc_scaffold_434_curated_107
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

125098..125631
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=E5C3Z8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFS30184.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
Antirestriction protein
SCNpilot_bf_inoc_scaffold_434_curated_108
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

125912..126127
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IQ51_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS15409.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_434_curated_109
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

126147..126626
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3QQ96_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEO54130.1}; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_434_curated_110
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(126930..127247)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5LFZ3_BACFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAH06950.1}; TaxID=272559 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / JCM 11019 / NCTC; 9343).;"
SCNpilot_bf_inoc_scaffold_434_curated_111
Bacteroides nordii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(127260..127709)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Bacteroides nordii CL02T12C05 RepID=I8XUV3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY53817.1}; TaxID=997884 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides nordii CL02T12C05.;"
conjugate transposon protein
SCNpilot_bf_inoc_scaffold_434_curated_112
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(127934..128848)
DNA (915bp) protein (305aa)
Conjugative transposon TraN protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IQ56_9BACE
Conjugative transposon TraN protein {ECO:0000313|EMBL:KDS20981.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
conjugate transposon protein rbh
SCNpilot_bf_inoc_scaffold_434_curated_113
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(128889..130268)
DNA (1380bp) protein (460aa)
Conjugative transposon TraM protein n=1 Tax=Bacteroides cellulosilyticus CL02T12C19 RepID=I9FPM6_9BACE
Conjugative transposon TraM protein {ECO:0000313|EMBL:EIY35589.1}; TaxID=997874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus CL02T12C19.;"
Protein of unknown function (DUF3714).
SCNpilot_bf_inoc_scaffold_434_curated_114
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(130243..130548)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=E5C3Y8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFS30174.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_434_curated_115
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(130552..131175)
DNA (624bp) protein (208aa)
Conjugative transposon TraK protein n=2 Tax=Bacteroides RepID=R9HAI5_BACT4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK68772.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
SCNpilot_bf_inoc_scaffold_434_curated_116
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(131190..132212)
DNA (1023bp) protein (341aa)
Conjugative transposon TraJ protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5ZZH0_9PORP
Conjugative transposon TraJ protein {ECO:0000313|EMBL:EKN16725.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
Homologues of TraJ from Bacteroides conjugative transposon.
SCNpilot_bf_inoc_scaffold_434_curated_117
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(132232..132861)
DNA (630bp) protein (210aa)
Conjugative transposon protein TraI n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3QQ87_9BACE
Conjugative transposon protein TraI {ECO:0000313|EMBL:EEO54121.1}; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_434_curated_118
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(132866..133222)
DNA (357bp) protein (119aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9B665_BACFG
Uncharacterized protein {ECO:0000313|EMBL:KDS20987.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_434_curated_119
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(133251..135755)
DNA (2505bp) protein (835aa)
TraG family conjugation system ATPase n=1 Tax=Bacteroides nordii CL02T12C05 RepID=I9SE16_9BACE
Conjugation system ATPase, TraG family protein {ECO:0000313|EMBL:KDS20988.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_434_curated_120
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(135752..136084)
DNA (333bp) protein (111aa)
Conjugative transposon protein TraF n=3 Tax=Bacteroides RepID=C3QQ84_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EXY28290.1}; TaxID=1339284 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T10.;"
conjugate transposon protein
Displaying items 91-120 of 128 in total

View Taxonomy