ggKbase home page

SCNpilot_bf_inoc_scaffold_25794_curated_2

Organism: scnpilot_dereplicated_Bacteroidia_2

near complete RP 52 / 55 MC: 5 BSCG 50 / 51 MC: 5 ASCG 12 / 38 MC: 4
Location: comp(292..1275)

Top 3 Functional Annotations

Value Algorithm Source
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:KKB49758.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.8
  • Coverage: 335.0
  • Bit_score: 448
  • Evalue 8.10e-123
TonB-linked outer membrane protein, SusC/RagA family id=2095554 bin=GWD2_Bacteroidales_45_23 species=Parabacteroides sp. ASF519 genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 63.0
  • Coverage: 330.0
  • Bit_score: 443
  • Evalue 1.40e-121
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 59.6
  • Coverage: 337.0
  • Bit_score: 413
  • Evalue 6.50e-113

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parabacteroides sp. HGS0025 → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 984
CAGGGTGTGGAAATTGCATTGAACACAATCCCCTTCCGTAACAAAGATTGGGAATGGAATTTGGATTTCACCTATACAAAGAATGAGAATAAGGTAATCGAACTACACCCTAACGTAGCAAATTACATTGCTCTGCGTGGTGATGTTGCTTATGGTAACTATCGTATCGGTTCTGTTGCCCAGGTGGGTGGTGCTTACGGTTTGTTGTTGACAGACTCTAAACCAGCTATCGACAAAGCTACAGGAAAGAAAATCTTACGTTTCACAAACAACGGTCGTGCAGCTTACTATGCTCGTAGCGGTAAAATCGAAGAGATCGGATCATTGACTCCAGACTTCCTGGGCTCTGTATCAACAGGTCTTCGTTATAAAAACATTACCATGCGTGCTGCATTGGATATGCGTTTTGGTGGTTACGTAGCATCTTACAACAACCGTTACGGTATGGCTTACGGATACACAGAAACATCCTTAAGATACCGCGATGCTGAACACGGTGGTGTTACCTGGACCAGCAAATATGATGGCAAAACTTACAGCGACGGTGTAATTCCGGATGGTATTTTTGCTGCCGGTACTAAGATTACTCAACCTAACGGTTCATCAGTAGACGTTGGCGGTATGACTTACGAAGCTGCTATGGCTGCCGGTTATGTAGAACCTTCTCACGCTTCTGGTCACCACTACTTCAACAACAGCTGGAGCCAGGGTACAGTTAACGACGATTGGGTAACAAAATTAAATTATATCGCATTGCGCGAAATCTCTTTCGGATACAGTGTTCCTCAGGCTTTTGCAAACAAATTGGGTGCTAAGAGCATGAATCTGGCTTTGTCTGCACGTAACCTTGGTTACCTGTACAACACAATGCCTAACAACGTAAATCCTGAAGGTGTTCGTGGTAACGATGCAACTGAATTCCGCGAGCGTTCATTCAGCCCGTATACTGCTAACTACATGTTTACTATTAATGTAGGCTTCTAA
PROTEIN sequence
Length: 328
QGVEIALNTIPFRNKDWEWNLDFTYTKNENKVIELHPNVANYIALRGDVAYGNYRIGSVAQVGGAYGLLLTDSKPAIDKATGKKILRFTNNGRAAYYARSGKIEEIGSLTPDFLGSVSTGLRYKNITMRAALDMRFGGYVASYNNRYGMAYGYTETSLRYRDAEHGGVTWTSKYDGKTYSDGVIPDGIFAAGTKITQPNGSSVDVGGMTYEAAMAAGYVEPSHASGHHYFNNSWSQGTVNDDWVTKLNYIALREISFGYSVPQAFANKLGAKSMNLALSARNLGYLYNTMPNNVNPEGVRGNDATEFRERSFSPYTANYMFTINVGF*