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SCNpilot_bf_inoc_scaffold_705_curated_18

Organism: scnpilot_dereplicated_Bacteroidia_2

near complete RP 52 / 55 MC: 5 BSCG 50 / 51 MC: 5 ASCG 12 / 38 MC: 4
Location: 11758..12264

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0NR69_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 78.8
  • Coverage: 165.0
  • Bit_score: 274
  • Evalue 1.00e-70
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EHQ02024.1}; TaxID=865937 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gillisia.;" source="Gillisia limnaea DSM 15749.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 166.0
  • Bit_score: 272
  • Evalue 5.40e-70
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 62.4
  • Coverage: 165.0
  • Bit_score: 220
  • Evalue 4.10e-55

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Taxonomy

Gillisia limnaea → Gillisia → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 507
ATGAACAAACAGGAGCAACAACAATTCTTTAAGGAAATCATTGAGCAACATAAAGGGATTTTGTTCAAGGTTGCCCGTGTGTATTGTCCAAACGAAAACGACAGTCAGGACTTGATACAGGAAATGATGATACAGGTATGGCAATCCATTCACAAATACAATGACCAATTTAAAATATCAACGTGGCTGTACCGTATTTCACTGAATGTAGCCATTTCATTTTATCGGAAAAACACAACAAGAGCAAACAGATTTACAGTACTGAACGAGCAAACGACAGAAATACTAACTGAAGACAAAGCGGAAACAGAACAGCAACTGAACTTATTGGAGCAGTTTATCAGTGAATTGAAAGAACTTGACAAAGCCTTGATATTATTGTATTTGGAAGACAAAAGCCACACTGAAATTGCTGAAGTATTAGGACTTTCCATAAGCAACGTAGGAACAAAAGTAGGACGTATAAAAAAGAAATTAAAAACACGGTTTTCACAATTAACACCATAA
PROTEIN sequence
Length: 169
MNKQEQQQFFKEIIEQHKGILFKVARVYCPNENDSQDLIQEMMIQVWQSIHKYNDQFKISTWLYRISLNVAISFYRKNTTRANRFTVLNEQTTEILTEDKAETEQQLNLLEQFISELKELDKALILLYLEDKSHTEIAEVLGLSISNVGTKVGRIKKKLKTRFSQLTP*