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SCNpilot_bf_inoc_scaffold_1248_curated_14

Organism: scnpilot_dereplicated_Bacteroidia_2

near complete RP 52 / 55 MC: 5 BSCG 50 / 51 MC: 5 ASCG 12 / 38 MC: 4
Location: 16634..17209

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor n=3 Tax=Parabacteroides RepID=B7BG64_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 60.3
  • Coverage: 189.0
  • Bit_score: 249
  • Evalue 3.00e-63
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:KKB52266.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.5
  • Coverage: 190.0
  • Bit_score: 250
  • Evalue 2.50e-63
RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 185.0
  • Bit_score: 208
  • Evalue 2.40e-51

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Taxonomy

Parabacteroides sp. HGS0025 → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 576
TTGGAAGAAAAAACAGACATACAACTATTTAATCAGCTCTATGCGACTAACAAACAGAAGTACATCCGGTTTGCATCTTCCTATGTACACGAAGATGCCGTTGCAGAAGATCTGGTAATGGAAAGTCTGATGTATTACTGGGAAAGGCGATCCTCTTTGGGACACATTGAGAATGTATCCATGTACATACTCACCGTGCTGAAGCATAAATGCCTGAACCATCTGCAGAGACAACGCACCTGGGATAATTTATCTGAAAACATGCTGACCGACACCCAATGGGACATCCAGATGCGAATTTCGTCCCTGGAGGCATGCAATCCGGAACAACTATTCTCGGACGAAGTCCAGCAACTGCTCGAAAAAGCACTTCAAAGTATGCCTGAAAAATCAAGGCAGATCTTCATAATGAGTCGGTACGAAGAAAAGAGCTATAAGGAAATAGCCTCTGCAATGAATTTATCTGTAAAAAGTGTCGAGTTTCATATGAGTAAAGTCCTGGGTGTACTCAGAAAAACATTAAAAGACTATCTCCCCTTGTTAATTACTGTCTTCGATTTCTTCTACAACCGATAA
PROTEIN sequence
Length: 192
LEEKTDIQLFNQLYATNKQKYIRFASSYVHEDAVAEDLVMESLMYYWERRSSLGHIENVSMYILTVLKHKCLNHLQRQRTWDNLSENMLTDTQWDIQMRISSLEACNPEQLFSDEVQQLLEKALQSMPEKSRQIFIMSRYEEKSYKEIASAMNLSVKSVEFHMSKVLGVLRKTLKDYLPLLITVFDFFYNR*