ggKbase home page

SCNpilot_bf_inoc_scaffold_253_curated_28

Organism: scnpilot_dereplicated_Bacteroidia_2

near complete RP 52 / 55 MC: 5 BSCG 50 / 51 MC: 5 ASCG 12 / 38 MC: 4
Location: comp(45661..46182)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003758070 similarity UNIREF
DB: UNIREF100
  • Identity: 91.3
  • Coverage: 173.0
  • Bit_score: 321
  • Evalue 7.40e-85
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EPT34561.1}; TaxID=888054 species="Bacteria; Bacteroidetes.;" source="Bacteroidetes bacterium oral taxon 272 str. F0290.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.0
  • Coverage: 174.0
  • Bit_score: 208
  • Evalue 7.50e-51
RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 34.8
  • Coverage: 178.0
  • Bit_score: 119
  • Evalue 7.90e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bacteroidetes bacterium oral taxon 272 → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 522
ATGAAAAACGAAGAGAACAGGCTCATAAAAAATTTAAAAGCCGGGGATGAAATAGCCTTTAAAAAGATATTCTATCTCTATAGTGACAGACTTTTCGTCTGGGCATATAATATAACCGGTGACTCTTCGGTATCCGCAGATATTGTCCAGGATTTTTTTATCCGTTGCTGGGAAAAAAGGGATATACTACCCGACAACTGTTCTTTCAAAGCATACGCTTATAAATCTATTTACAACGCATCATTGAATTATATCAGGGATAATAAACGTTTCGTGCATAGTTATGAAATCACCATAGACCTGATCGACGATGATGTGCGCGATGAAGATGTGGAAGAATTAAAAAGATTACTCTTGAAAGCCATTGACGAGTTACCCGACAGATGTAAGAAAATATTTGTAATGACGACCCTGGAGAAGAAGAAATACGTTGAAGTGGCCGACCTGTTAGGTATATCCGTCAATACGGTTAAAGTACAGGTATCCAAAGCATATCGGATTTTAAAAGAGAAAATAGGATAA
PROTEIN sequence
Length: 174
MKNEENRLIKNLKAGDEIAFKKIFYLYSDRLFVWAYNITGDSSVSADIVQDFFIRCWEKRDILPDNCSFKAYAYKSIYNASLNYIRDNKRFVHSYEITIDLIDDDVRDEDVEELKRLLLKAIDELPDRCKKIFVMTTLEKKKYVEVADLLGISVNTVKVQVSKAYRILKEKIG*