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SCNpilot_bf_inoc_scaffold_1643_curated_14

Organism: scnpilot_dereplicated_Bacteroidia_2

near complete RP 52 / 55 MC: 5 BSCG 50 / 51 MC: 5 ASCG 12 / 38 MC: 4
Location: 10591..11145

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor n=2 Tax=Parabacteroides merdae RepID=A7A9Z4_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 77.9
  • Coverage: 181.0
  • Bit_score: 279
  • Evalue 3.40e-72
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EDN88451.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.9
  • Coverage: 181.0
  • Bit_score: 279
  • Evalue 4.80e-72
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 36.4
  • Coverage: 184.0
  • Bit_score: 138
  • Evalue 1.70e-30

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Taxonomy

Parabacteroides merdae → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 555
ATGAAAGGATCAGAGGAACAATATGTATTAGCTGAGGTTGCCAGAGGGAATGTAGAAGCTTTCGAACGTTTGTTTTACGAGCATCAACCCAGGTTGCTTCATTTCCTTATTGGCTTAACTCACGACCGGGAAGTGAGCCGAGACATGGCTCAAGATCTATTCCTTTCTTTATGGAAGGATAGACGCAAGCTATCCGATGTGCATTCATTTTCTTCTTATCTTTTCCAGATGGCCAGATTTACAGTTTATGATTATTTTGACAGATTGATTGTGTCCGAAAAGTATACAAATGAATATTTAAAAGAGGCATGTGTCGCGCAATCTGGAGAAGAGGAAATTTTTGTATGCGAACTGCAAGCTATAATAAAAAAGACTGTAGAAGGGATGTCACCCCAACAGGCAAAGATTTACTGGATGAGCCGCGAGGAGGGGTTATCCAATGATGAAATTGCTTTGCGGTTGGGAATAAGTAAGCGCACAGTTGAAAATCATCTCACGGCTGCCCTTTCAATTCTTCGTAAAGTAGTTTACCTCTTGTTTGTATGTATTAATTGA
PROTEIN sequence
Length: 185
MKGSEEQYVLAEVARGNVEAFERLFYEHQPRLLHFLIGLTHDREVSRDMAQDLFLSLWKDRRKLSDVHSFSSYLFQMARFTVYDYFDRLIVSEKYTNEYLKEACVAQSGEEEIFVCELQAIIKKTVEGMSPQQAKIYWMSREEGLSNDEIALRLGISKRTVENHLTAALSILRKVVYLLFVCIN*