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SCNpilot_bf_inoc_scaffold_699_curated_14

Organism: scnpilot_dereplicated_Bacteroidia_2

near complete RP 52 / 55 MC: 5 BSCG 50 / 51 MC: 5 ASCG 12 / 38 MC: 4
Location: 10029..10595

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, expansion family 1 n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5ZAA3_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 53.2
  • Coverage: 188.0
  • Bit_score: 195
  • Evalue 5.10e-47
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EKN12579.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.2
  • Coverage: 188.0
  • Bit_score: 195
  • Evalue 7.10e-47
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 189.0
  • Bit_score: 171
  • Evalue 3.20e-40

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Taxonomy

Parabacteroides goldsteinii → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 567
ATGAGGGATGAAAAAATACATATACGGGGATTACTGGATGATTCATACAAAGATTTCACTGTTTTGTATGAGTACTGGACTCCACATTTGTACCAATTTGTTTTTTCACTCGTGAAATCGCGGTCGATAACAAAAGATATTGTACAGGAGACATTTATCAAGATATGGATAAAACGTAAACAAATCAATCCGGATCAATCATTTAAATCCTATCTTTTTACCATAGCATACCGCATTGTCCTGAAAGAATTCCGACGGCAAATCAATCATCCGCTGATGGGGGATTATCTGGCATACAATAACGAGGTAGCCTTGTCGGAAAACACTACCGAACAGAAGCTTGATCTGGATGAGTTCCTTATTCAATATGAGAAAGCAAAGACTAAATTAACCCCTCGCCAACGCGAAGTTTTTGAAATGAATAAGGAAATGCAAGTCTCTGTTTCTGAAATAGCAGACAAACTATCCTTGACAAAACAGTCCGTTCGAAATCAACTCTCCGCTTCACTCAAATCCCTTCGAAAAGAATTGGTAAAGTTTACCGGTTTCTTGTTTTATGTTTTATAA
PROTEIN sequence
Length: 189
MRDEKIHIRGLLDDSYKDFTVLYEYWTPHLYQFVFSLVKSRSITKDIVQETFIKIWIKRKQINPDQSFKSYLFTIAYRIVLKEFRRQINHPLMGDYLAYNNEVALSENTTEQKLDLDEFLIQYEKAKTKLTPRQREVFEMNKEMQVSVSEIADKLSLTKQSVRNQLSASLKSLRKELVKFTGFLFYVL*