ggKbase home page

SCNpilot_bf_inoc_scaffold_2108_curated_1

Organism: scnpilot_dereplicated_Bacteroidia_2

near complete RP 52 / 55 MC: 5 BSCG 50 / 51 MC: 5 ASCG 12 / 38 MC: 4
Location: 2..592

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory helix-turn-helix s, AraC family protein id=2173815 bin=GWE2_Bacteroidetes_42_24 species=Bizionia argentinensis genus=Bizionia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 57.4
  • Coverage: 197.0
  • Bit_score: 245
  • Evalue 3.40e-62
transcriptional regulator, arac family similarity KEGG
DB: KEGG
  • Identity: 43.6
  • Coverage: 195.0
  • Bit_score: 175
  • Evalue 1.40e-41
Tax=GWF2_Bacteroidetes_43_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.4
  • Coverage: 197.0
  • Bit_score: 245
  • Evalue 4.80e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWF2_Bacteroidetes_43_11_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 591
ATGTTTTCGAGCCAGTTTCTGCTGGATAATCAGATCCCCATTTGTTTTATCGATGAGCTTCGGCTGTTTCATGATTATGGAGATTCTCCCCCGCTTGCGTTAAATCAGGATGTGCTGGAAAGGCTGGTCAATTATGCCGACGAGATGGAGCAGGCCGTTCAATCGAATATGAAATTCAAAGAACAAGCTGTAGCCTCTCTGTTGAACCTGCTCCTTATAAGATGCGATAATCTATGTGCACTTTCCAATGAGAATCCTCAGACGATAGAGGCAAAGAATACACTGCTGAAATCTTTCAGAAAGATGGTGGACGAGAAGTTTGCCGACTGGCACCAGATAGCAGATTATGCTACGGCATTGAACGTGACTCCCGACCACCTGAACCGGGTGGTGAAAAATATAATCGGTGTTACGGCCAAAGAGTATGTACAGTCGCGTATCATTGTGGAGGCCAAACGGTTGCTTTACTTCTCCGACCAATCAGCCAAAGAGATAGGTTATCGGCTGGGCTTTAGCGAGCCGGCCAACTTTAGTGCTTTTTTTAAGAATGTCACCGGCATTTCTCCTTCAAATTTTAAATTGAAACGCTGA
PROTEIN sequence
Length: 197
MFSSQFLLDNQIPICFIDELRLFHDYGDSPPLALNQDVLERLVNYADEMEQAVQSNMKFKEQAVASLLNLLLIRCDNLCALSNENPQTIEAKNTLLKSFRKMVDEKFADWHQIADYATALNVTPDHLNRVVKNIIGVTAKEYVQSRIIVEAKRLLYFSDQSAKEIGYRLGFSEPANFSAFFKNVTGISPSNFKLKR*