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SCNpilot_bf_inoc_scaffold_391_curated_3

Organism: scnpilot_dereplicated_Bacteroidia_2

near complete RP 52 / 55 MC: 5 BSCG 50 / 51 MC: 5 ASCG 12 / 38 MC: 4
Location: 5644..6252

Top 3 Functional Annotations

Value Algorithm Source
RagB/SusD domain-containing protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C4R0_SPHS2 similarity UNIREF
DB: UNIREF100
  • Identity: 59.8
  • Coverage: 204.0
  • Bit_score: 243
  • Evalue 1.70e-61
Glycan metabolism protein RagB {ECO:0000313|EMBL:KDN54088.1}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.8
  • Coverage: 204.0
  • Bit_score: 249
  • Evalue 3.40e-63
RagB/SusD domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 59.8
  • Coverage: 204.0
  • Bit_score: 243
  • Evalue 5.50e-62

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Taxonomy

Flavobacterium sp. EM1321 → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 609
ATGGTAGATGGGTATACAACATTCAGGGGTGACACGTATATCTCTTATCCCGGTTCCGGGGCCCCGGATGATGTATCTAAATATATACAATGGAGTGGCTATTCAATTCGAAAATTCATGGATCCTAATATGAATGCGAATCTATATAATTCCGGGAATAATTTTAGTTTGATCCGATATGCCGAAGTGCTGTTGAGCTATTTAGAATGCAAGCTGGAGGCCGGTGATGGTATTGACCAGGGATTATTGGATTTAACGATTAATCCGATTCGCAGGCGCGCCGGTATGCCGGTTGTAACGGAAACCAACCCGGAAGAGCTCAGAAAGATTGTACGAAGGGAACGCCGCGTCGAACTCGCTTTTGAAGGGTTGCGGTATTATGACGTACTAAGATGGGGAATTATAGCCGATGAACTGGAAAACAGGCAATTTACCGGAATGAAAGTGGCGACAAGCCCGGAAACGAACACTACGGAATATGATGTCGATCCAGAGGGGTACATAATCTATAAAAAAACCAATTTCAAGCGTGGTGTAAATGAATTATGGCCAATCCCGTTATCTGAACGCGAAATAAATCCCAATCTTACACAAAACACGGGCTATTAG
PROTEIN sequence
Length: 203
MVDGYTTFRGDTYISYPGSGAPDDVSKYIQWSGYSIRKFMDPNMNANLYNSGNNFSLIRYAEVLLSYLECKLEAGDGIDQGLLDLTINPIRRRAGMPVVTETNPEELRKIVRRERRVELAFEGLRYYDVLRWGIIADELENRQFTGMKVATSPETNTTEYDVDPEGYIIYKKTNFKRGVNELWPIPLSEREINPNLTQNTGY*