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SCNpilot_bf_inoc_scaffold_1659_curated_19

Organism: scnpilot_dereplicated_Bacteroidia_2

near complete RP 52 / 55 MC: 5 BSCG 50 / 51 MC: 5 ASCG 12 / 38 MC: 4
Location: 17753..18202

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, HxlR family n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2H5_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 75.7
  • Coverage: 107.0
  • Bit_score: 168
  • Evalue 5.30e-39
transcriptional regulator, hxlr family similarity KEGG
DB: KEGG
  • Identity: 75.7
  • Coverage: 107.0
  • Bit_score: 168
  • Evalue 1.70e-39
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:ADQ78919.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.7
  • Coverage: 107.0
  • Bit_score: 168
  • Evalue 7.40e-39

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Taxonomy

Paludibacter propionicigenes → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 450
ATGGATGTGTCTAAATCCCTTAATTCATATATTTGTTACGCAAAGAAACTAACAATAGTTTGTATTTGTAACAGGTTACGAAAAGGTAACATCAAAATAAGTGGTAACGAAAAAGTAACTATAATGGTCAAATCAGGTAAAAAAATAAATTGTCCGGTTACAGCCTCTATCGAACTAATTGGAGGTAAGTGGAAAACAATCATTTTATATTCGTTATTGAGCGGCACAAGGCGTTTTGGCGAAATAGCGGTGCGCATACCTGATATTTCAAGGAAAGTGCTGACCGAACAACTTAAGGAGCTGGAGTCGGATGGGTTAATTTTGCGTGAACAATACAAGGAGATCCCTCCTAGGGTGGAGTATTCGCTTACAGAACTTGGGAAAAGTCTATCACCTGTGTTCAGAGAGTTGGAAATCTGGGGTACTGAAAACCTGTTATCAAAAGAATAA
PROTEIN sequence
Length: 150
MDVSKSLNSYICYAKKLTIVCICNRLRKGNIKISGNEKVTIMVKSGKKINCPVTASIELIGGKWKTIILYSLLSGTRRFGEIAVRIPDISRKVLTEQLKELESDGLILREQYKEIPPRVEYSLTELGKSLSPVFRELEIWGTENLLSKE*